Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_O18
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    26   0.30 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    26   0.30 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    24   0.93 
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    24   0.93 
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    24   0.93 
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    24   0.93 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   1.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   1.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    24   1.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    24   1.2  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    24   1.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    24   1.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   1.6  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   2.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   2.1  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   3.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   6.6  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   6.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   6.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.7  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNEFGIDTTLIY 224
           I ++LS  +++NN+Y Y     NN+N    +  L Y
Sbjct: 80  IISSLSNNTIHNNNYKY-NYNNNNYNNNNYNKKLYY 114


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNEFGIDTTLIY 224
           I ++LS  +++NN+Y Y     NN+N    +  L Y
Sbjct: 80  IISSLSNNTIHNNNYKY-NYNNNNYNNNNYNKKLYY 114


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNE 197
           I ++LS  +++NN+Y Y     NN+N+
Sbjct: 81  IISSLSNNTIHNNNYKY-NYNNNNYNK 106


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNE 197
           I ++LS  +++NN+Y Y     NN+N+
Sbjct: 81  IISSLSNNTIHNNNYKY-NYNNNNYNK 106


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNE 197
           I ++LS  +++NN+Y Y     NN+N+
Sbjct: 81  IISSLSNNTIHNNNYKY-NYNNNNYNK 106


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNE 197
           I ++LS  +++NN+Y Y     NN+N+
Sbjct: 81  IISSLSNNTIHNNNYKY-NYNNNNYNK 106


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS    Y+N+ +Y   Y NN+N
Sbjct: 81  IISSLSNNYKYSNYNNYNNNYNNNYN 106


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS    Y+N+ +Y   Y NN+N
Sbjct: 81  IISSLSNNYKYSNYNNYNNNYNNNYN 106


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS ++++NN+ +Y KL   N N
Sbjct: 81  IISSLSNKTIHNNNNNYKKLQYYNIN 106


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS ++++NN+ +Y KL   N N
Sbjct: 81  IISSLSNKTIHNNNNNYKKLQYYNIN 106


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS ++++NN+ +Y KL   N N
Sbjct: 81  IISSLSNKTIHNNNNNYKKLQYYNIN 106


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS ++++NN+ +Y KL   N N
Sbjct: 81  IISSLSNKTIHNNNNNYKKLQYYNIN 106


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFN 194
           I ++LS ++++NN+ +Y KL   N N
Sbjct: 314 IISSLSNKTIHNNNNNYKKLQYYNIN 339


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNEF 200
           I ++LS ++++NN+      Y NN+N +
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNNNYNNY 341


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 126 NLSFRSLYNNHYSY*KLYQNNFN 194
           N ++++ YNN+Y+  KLY N  N
Sbjct: 308 NYNYKN-YNNNYNSKKLYYNIIN 329


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 126 NLSFRSLYNNHYSY*KLYQNNFN 194
           N ++++ YNN+Y+  KLY N  N
Sbjct: 319 NYNYKN-YNNNYNSKKLYYNIIN 340


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 147 YNNHYSY*KLYQNNFN 194
           YNN+Y+    Y NN+N
Sbjct: 330 YNNNYNNYNNYNNNYN 345



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 132 SFRSLYNNHYSY*KLYQNNFNE 197
           ++ + YNN+ +Y   Y NN+ +
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYKK 350


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 IAANLSFRSLYNNHYSY*KLYQNNFNEF 200
           I ++LS    Y+N+ +Y     NN+N +
Sbjct: 314 IISSLSNNYKYSNYNNYNNYNNNNYNNY 341


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 119 YISNSKGAVKSRN--LYHNIISFSAK*FSYFR 30
           Y SNS GAV +RN  ++ +++S + + F   R
Sbjct: 701 YRSNSMGAVMTRNSEMFSSLLSDTEQHFRQHR 732


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 117 IAANLSFRSLY-NNHYSY*KLYQNNFN 194
           I ++LS R+++ NN+Y Y     NN+N
Sbjct: 81  IISSLSNRTIHNNNNYKY-NYNNNNYN 106


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 14  IHNVCIGNTKIILH*KILYYDINYV 88
           IHN    N     + K LYY+INY+
Sbjct: 90  IHNNNNYNNNNYNNYKKLYYNINYI 114


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 422 EIDMVHHASLSWKKYINL 369
           E+D+  +    WKK +NL
Sbjct: 83  EVDLEFYLGKEWKKNLNL 100


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = +3

Query: 108 IGYIAANLSFRSLYNNHYSY*KLYQNNFNEFGIDTTLIYGN 230
           I  ++ N ++ +  NN+Y       N+  +  +   + YGN
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPVPVYYGN 122


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 370 KFIYF-FHDNDA*CTISISLSKFYIAC 447
           K +YF F D  A C   +++  +YI+C
Sbjct: 166 KGVYFAFRDQGA-CISILAIKVYYISC 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,350
Number of Sequences: 438
Number of extensions: 3659
Number of successful extensions: 65
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)