BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_O17
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p pro... 58 2e-08
BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p pro... 58 2e-08
AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p pro... 58 2e-08
AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB... 58 2e-08
AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA... 58 2e-08
>BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p
protein.
Length = 190
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 749 GGFRSXRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 630
GG RS R+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 151 GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p
protein.
Length = 190
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 749 GGFRSXRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 630
GG RS R+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 151 GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p
protein.
Length = 190
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 749 GGFRSXRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 630
GG RS R+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 151 GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB,
isoform B protein.
Length = 190
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 749 GGFRSXRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 630
GG RS R+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 151 GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA,
isoform A protein.
Length = 190
Score = 57.6 bits (133), Expect = 2e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 749 GGFRSXRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 630
GG RS R+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 151 GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,424,629
Number of Sequences: 53049
Number of extensions: 546775
Number of successful extensions: 1014
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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