Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_O16
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041032-1|AAH41032.1| 417|Homo sapiens prolactin regulatory el... 116 5e-26
BC016906-1|AAH16906.1| 345|Homo sapiens PREB protein protein. 116 5e-26
BC016472-1|AAH16472.1| 417|Homo sapiens prolactin regulatory el... 116 5e-26
BC012890-1|AAH12890.1| 417|Homo sapiens prolactin regulatory el... 116 5e-26
BC002765-1|AAH02765.1| 417|Homo sapiens prolactin regulatory el... 116 5e-26
AK023064-1|BAB14385.1| 417|Homo sapiens NA, nuclear gene encodi... 116 5e-26
AF227166-1|AAF74572.1| 417|Homo sapiens prolactin regulatory bi... 116 5e-26
AF226684-1|AAG01692.1| 417|Homo sapiens prolactin regulatory el... 116 5e-26
AF203687-1|AAF19192.1| 417|Homo sapiens SEC12 protein. 116 5e-26
AC013403-6|AAX93170.1| 417|Homo sapiens unknown protein. 116 5e-26
AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein. 34 0.38
L40636-1|AAB08520.1| 984|Homo sapiens protein tyrosine kinase p... 31 2.7
EF015895-1|ABM64206.1| 412|Homo sapiens basic helix-loop-helix ... 31 2.7
CR456921-1|CAG33202.1| 412|Homo sapiens BHLHB2 protein. 31 2.7
BC111744-1|AAI11745.1| 984|Homo sapiens EPH receptor B1 protein. 31 2.7
BC082238-1|AAH82238.1| 412|Homo sapiens basic helix-loop-helix ... 31 2.7
AF353635-1|AAK49525.1| 409|Homo sapiens bHLH transcription fact... 31 2.7
AB043885-1|BAB18565.1| 412|Homo sapiens bHLH transcriptional fa... 31 2.7
AB004066-1|BAA21720.1| 412|Homo sapiens DEC1 protein. 31 2.7
BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated prot... 30 6.2
BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated prot... 30 6.2
BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated prot... 30 6.2
BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated prot... 30 6.2
BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated prot... 30 6.2
AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated prot... 30 6.2
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 30 8.2
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 30 8.2
BC016018-1|AAH16018.1| 278|Homo sapiens ACMSD protein protein. 30 8.2
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 30 8.2
AC016725-1|AAY14997.1| 278|Homo sapiens unknown protein. 30 8.2
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 30 8.2
>BC041032-1|AAH41032.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>BC016906-1|AAH16906.1| 345|Homo sapiens PREB protein protein.
Length = 345
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 173 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 232
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 233 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 291
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 292 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 336
>BC016472-1|AAH16472.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>BC012890-1|AAH12890.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>BC002765-1|AAH02765.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AK023064-1|BAB14385.1| 417|Homo sapiens NA, nuclear gene encoding
mitochondrial protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AF227166-1|AAF74572.1| 417|Homo sapiens prolactin regulatory
binding-element protein protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AF226684-1|AAG01692.1| 417|Homo sapiens prolactin regulatory
element-binding protein protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AF203687-1|AAF19192.1| 417|Homo sapiens SEC12 protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AC013403-6|AAX93170.1| 417|Homo sapiens unknown protein.
Length = 417
Score = 116 bits (280), Expect = 5e-26
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Frame = -3
Query: 637 YLFRRCRFGPNEDKEDAHRMFTIANPXSRSGKQKGL-LQLWDPKDG-SLRKTVLVNESLS 464
Y ++ CRFG D+ R+FT+ P R + L WD + LR +E +S
Sbjct: 245 YRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVS 304
Query: 463 ALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVAS 284
L V + G F+G+GT+ +GSV IYIAFSLQ + +VR AH + VT V FLP +G GP +
Sbjct: 305 CLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLG 363
Query: 283 RSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSL 149
E AL S++VD+ +H LP R SVP+W+ ++L + ++ T L
Sbjct: 364 SHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408
>AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein.
Length = 1985
Score = 34.3 bits (75), Expect = 0.38
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 549 PANRKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVC 376
PA+R++ PR A C RR +H R P A ++ + +P F +P C
Sbjct: 32 PASRRLRAPGSRPRLAPCTRRAAQPAHARMAPRAAGGAPLSARAAAASPPPFQTPPRC 89
>L40636-1|AAB08520.1| 984|Homo sapiens protein tyrosine kinase
protein.
Length = 984
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 468 CRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACCT 361
C+ P+GT AS + CS PS SP+ S CT
Sbjct: 267 CKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICT 302
>EF015895-1|ABM64206.1| 412|Homo sapiens basic helix-loop-helix
domain-containing protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 286 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 324
>CR456921-1|CAG33202.1| 412|Homo sapiens BHLHB2 protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 286 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 324
>BC111744-1|AAI11745.1| 984|Homo sapiens EPH receptor B1 protein.
Length = 984
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 468 CRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACCT 361
C+ P+GT AS + CS PS SP+ S CT
Sbjct: 267 CKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICT 302
>BC082238-1|AAH82238.1| 412|Homo sapiens basic helix-loop-helix
domain containing, class B, 2 protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 286 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 324
>AF353635-1|AAK49525.1| 409|Homo sapiens bHLH transcription factor
DEC1 protein.
Length = 409
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 283 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 321
>AB043885-1|BAB18565.1| 412|Homo sapiens bHLH transcriptional
factor DEC1 protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 286 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 324
>AB004066-1|BAA21720.1| 412|Homo sapiens DEC1 protein.
Length = 412
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 429 PTKRPSSRTVSADSDSFTSTVFRSEPSLGSQSCSRPFCLP 548
PTK+ + +S D FTS+ S P LG PFCLP
Sbjct: 286 PTKK-NRMQLSDDEGHFTSSDLISSPFLGPHPHQPPFCLP 324
>BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated protein
4.12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 540 RKVCCSSGTPRTARCGRRCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
R CC + RT C C +S CR P S P PS S S C +CC
Sbjct: 102 RPSCCQTTCCRTTCCRPSCCVSSCCR--PQ--CCQSVCCQPTCCRPSCCISSSCCPSCC 156
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 489 RCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
+CW HCR GT AAS + P P+ FT P C
Sbjct: 4235 QCW--EHCRN--GGTCAASPSGMPTCRCPTGFTGPKCTQQVC 4272
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 489 RCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
+CW HCR GT AAS + P P+ FT P C
Sbjct: 4235 QCW--EHCRN--GGTCAASPSGMPTCRCPTGFTGPKCTQQVC 4272
>BC016018-1|AAH16018.1| 278|Homo sapiens ACMSD protein protein.
Length = 278
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 550 SGKQKGLLQLWDPK---DGSLRKTVLVNESLSALTVRDDGRFVGVGTM 416
+G QK +L+ W K + +L L+N L++ V RFVG+GT+
Sbjct: 12 AGIQKFVLEKWTKKAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTL 59
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 489 RCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
+CW HCR GT AAS + P P+ FT P C
Sbjct: 4235 QCW--EHCRN--GGTCAASPSGMPTCRCPTGFTGPKCTQQVC 4272
>AC016725-1|AAY14997.1| 278|Homo sapiens unknown protein.
Length = 278
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 550 SGKQKGLLQLWDPK---DGSLRKTVLVNESLSALTVRDDGRFVGVGTM 416
+G QK +L+ W K + +L L+N L++ V RFVG+GT+
Sbjct: 12 AGIQKFVLEKWTKKAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTL 59
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 489 RCW*TSHCRR*PSGTTAASWASGPCSVAPSTFTSPSVCSACC 364
+CW HCR GT AAS + P P+ FT P C
Sbjct: 2050 QCW--EHCRN--GGTCAASPSGMPTCRCPTGFTGPKCTQQVC 2087
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,683,551
Number of Sequences: 237096
Number of extensions: 1665787
Number of successful extensions: 5570
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5524
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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