Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_O11
(311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.22
Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical pr... 30 0.39
Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical pr... 26 4.8
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 26 4.8
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 26 4.8
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 26 4.8
Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical pr... 25 8.4
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr... 25 8.4
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein. 25 8.4
>Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical
protein F32A7.6 protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.22
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 251 GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 108
GRN N FV NGG+ G+N +D + + TL F + SG A Y
Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312
>Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical
protein F26E4.6 protein.
Length = 84
Score = 29.9 bits (64), Expect = 0.39
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 212 NGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 81
N G LPF + N++ + + G AP+++ +QL K
Sbjct: 38 NDGWASARLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81
>Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical
protein F43A11.4 protein.
Length = 323
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 190 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTF 297
FSP PL WF +T + +F + N +II +F
Sbjct: 3 FSPDADPLNWFAASVMT--INGVFGITCNTLIIASF 36
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 200 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 78
P L + +R LYFI G GL A L+T +L K+
Sbjct: 193 PRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKR 233
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 200 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 78
P L + +R LYFI G GL A L+T +L K+
Sbjct: 193 PRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKR 233
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 200 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 78
P L + +R LYFI G GL A L+T +L K+
Sbjct: 262 PRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKR 302
>Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical
protein T09A5.7 protein.
Length = 103
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 282 YPIDSHLKQIGQKCGNEFREK 220
+P HLKQI KC EF +K
Sbjct: 10 FPECDHLKQIYDKCFTEFFQK 30
>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
protein F46F11.9b protein.
Length = 1282
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -3
Query: 198 WRESTLRHSQPLQADIVFHPICGLWTISTLSHHPSPAFEEVIQAAEIL 55
+R+ R S+P + + H + ++ +ST +P F ++IQ + L
Sbjct: 97 FRDVLARCSEPSEHESFGHYLACIFVVSTEDENPLGEFSKMIQTQQTL 144
>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
protein F46F11.9a protein.
Length = 1280
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -3
Query: 198 WRESTLRHSQPLQADIVFHPICGLWTISTLSHHPSPAFEEVIQAAEIL 55
+R+ R S+P + + H + ++ +ST +P F ++IQ + L
Sbjct: 97 FRDVLARCSEPSEHESFGHYLACIFVVSTEDENPLGEFSKMIQTQQTL 144
>AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein.
Length = 103
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 282 YPIDSHLKQIGQKCGNEFREK 220
+P HLKQI KC EF +K
Sbjct: 10 FPECDHLKQIYDKCFTEFFQK 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,030,508
Number of Sequences: 27780
Number of extensions: 135755
Number of successful extensions: 316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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