Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_O07
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -3

Query: 637 LAIKTDPTFLGRLAHVYIGAGHIHTEEYPTAEFNAHMDVEAYHVVTENANPEKVTIFPFS 458
           +A+ ++    G +  V++G  H H     +   N H+ VE    + +N +  + TI   S
Sbjct: 522 IAVHSEQNVPGAVVRVFLGPKHDHQGRPISISKNQHLFVELDQFI-QNLHAGENTIIRNS 580

Query: 457 Q 455
           Q
Sbjct: 581 Q 581


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 176 LTLSRLKSIDSFYWISSRTMPENSPNDNTRNTDLS 72
           L L+  + I + Y  S   +  N PNDN RNT +S
Sbjct: 10  LALANGEEIKTIY--SWNVIEYNFPNDNIRNTLIS 42


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = -3

Query: 514 YHVVTENANPEKVTIFPFSQVQKYCNFSREWRINVLGAIDTEIIRAQNKY 365
           YH    +   E +   P      +  FS+E  +  LGA D EI +    Y
Sbjct: 329 YHTPEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTIY 378


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 677 PYHHHYRRADQLSFGH*NGP 618
           P+HHH+ +   L   H   P
Sbjct: 350 PHHHHHHQTQSLQHLHYRQP 369


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 169 RVSDANIGVFFIDKRITCDSPXFLHTK 249
           R+SDA +G+F     I  D P   +T+
Sbjct: 331 RLSDAELGLFCSVVVIAADRPGLRNTE 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,334
Number of Sequences: 438
Number of extensions: 4591
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)