Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_O06
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-4|CAB04556.1|  360|Caenorhabditis elegans Hypothetical pr...    32   0.52 
Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    31   0.68 
AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical ...    31   0.68 
Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical ...    29   4.8  

>Z81562-4|CAB04556.1|  360|Caenorhabditis elegans Hypothetical
           protein K03D7.7 protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +2

Query: 8   TNTHSTVARXIVKLSKS--LLSHXTVPPLNTQVGIKNLXKVSQNI*SY*GTLLRTYNQSL 181
           TN+       ++K++K   L SH + P L+  + IK L  +S  + +     LR  ++SL
Sbjct: 87  TNSMMKTFNAMMKITKKRKLKSHISKPSLS-DMPIKILATISDYLETKDRMNLRKVSRSL 145

Query: 182 QNEDSFQKIFSYII*VCYLLNYIRNKLEKKRIQ 280
           Q+   +Q      + +CY  N +  K+ KKRI+
Sbjct: 146 QDFVDYQGSGINSLEICYGHNSVSLKIVKKRIE 178


>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = -1

Query: 347 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 261
           K++ T LL+ + FC  +D+F+C V   +FFL
Sbjct: 60  KNVKTSLLINHLFCALLDLFLCTVCTVYFFL 90


>AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical
           protein Y61B8A.2 protein.
          Length = 356

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 347 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 261
           K++ T LLV +FFC  +D+ +C +S  +FFL
Sbjct: 60  KNVRTPLLVNHFFCAFLDLTLCTLSTVYFFL 90


>Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical
           protein Y57G11C.6 protein.
          Length = 482

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 451 KSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 594
           KS  +  PR    FC+ C+       F K+ VTK  +G  K    N Y
Sbjct: 407 KSIRSQRPRAVDSFCQYCSLYISLLYFIKKKVTKPAEGDKKSTPTNKY 454


>AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical
           protein Y18H1A.1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 439 ASTKKSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 594
           A   KS  +  PR    FC+ C+       F K+ VTK  +G  K   +N Y
Sbjct: 346 ADIVKSIRSQRPRAVDSFCQYCSLYISLLYFIKKKVTKPAEGDKKPTLSNKY 397


>AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical
           protein C24D10.1 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +1

Query: 439 ASTKKSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 594
           A   KS     PR    FC+ C+       F K+ VTK   G  K    N Y
Sbjct: 403 ADIVKSIRTQRPRAVDSFCQYCSLYISLLYFIKKKVTKPADGDKKSTPTNKY 454


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,670
Number of Sequences: 27780
Number of extensions: 280804
Number of successful extensions: 718
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)