Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_O04
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm rece...    28   5.8  
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical...    28   7.7  

>AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical
           protein T11F8.1 protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 41  RVGQITLHLENLFALFSFYNFKXNEICHHPCF*I-HILHSYLFLNSNWQYKRICKNIPLY 217
           R+G   +   NL AL  FYNF+ + +  +  F + ++  +  +    W+ + +C+ +  Y
Sbjct: 83  RIGTYGIFQNNLLALLIFYNFQNSPLTTYFAFFVSNVTTAMFYFAFIWKMQPMCREMKCY 142


>AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 16 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 517 INILKLQFTIPYFSIIVHSFITYFNDFFLLI*SVF 413
           I++L +QF   YF+I    ++ YF  ++ LI  V+
Sbjct: 104 ISLLAVQFLYRYFAIFHEYYLKYFKGWYFLIWIVY 138


>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
           protein Y51H7C.11 protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 42  VSGKSLSIWKIFLLCFPFITLSXMKFAITHAF 137
           + G  LS+WK   +  P + LS   F+ +H F
Sbjct: 744 IQGMRLSMWKKKFISEPLLQLSLQSFSTSHKF 775


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,900,843
Number of Sequences: 27780
Number of extensions: 292703
Number of successful extensions: 697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)