Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_O02
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein. 32 1.9
AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein. 32 1.9
AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein. 32 1.9
AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical rhabdomyos... 31 2.5
AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protei... 31 2.5
AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen ... 31 2.5
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 30 7.5
DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protei... 30 7.5
BC047945-1|AAH47945.1| 500|Homo sapiens tripartite motif-contai... 30 7.5
BC033314-1|AAH33314.1| 341|Homo sapiens tripartite motif-contai... 30 7.5
BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein. 30 7.5
AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein. 30 7.5
AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein. 30 7.5
>AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 327 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 455
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 327 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 455
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein.
Length = 2147
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 327 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 455
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 945 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 987
>AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.15 protein.
Length = 578
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 558 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 424
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 306 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 349
>AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protein
PIPMT protein.
Length = 852
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 558 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 424
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 580 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 623
>AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen
KW-2 protein.
Length = 853
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 558 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 424
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 581 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 624
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 29.9 bits (64), Expect = 7.5
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 222 PTRIPTKDLAT-PLNQIH*AVTITTRSLSQSSGWCAPETRANYLPPTSETGSSARASSCR 398
P+ +PT + P A T +T S +S AP T L PT+ T S+ S+
Sbjct: 39 PSPVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTT-LAPTTSTTSAPTTSTTS 97
Query: 399 TPT*SLNYRSSPNQS 443
TPT S S+P S
Sbjct: 98 TPTSSTT--STPQTS 110
>DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protein
69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC047945-1|AAH47945.1| 500|Homo sapiens tripartite
motif-containing 69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC033314-1|AAH33314.1| 341|Homo sapiens tripartite
motif-containing 69 protein.
Length = 341
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 163 LSPLTLDPKTAHPNLVLSKSQTSV 186
>BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein.
Length = 503
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein.
Length = 279
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 101 LSPLTLDPKTAHPNLVLSKSQTSV 124
>AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein.
Length = 296
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 384 LSPMTLSPKSVEDNLLLSPAHTNL 313
LSP+TL PK+ NL+LS + T++
Sbjct: 118 LSPLTLDPKTAHPNLVLSKSQTSV 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,370,356
Number of Sequences: 237096
Number of extensions: 1542312
Number of successful extensions: 3569
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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