Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N22
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 78 2e-15
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 73 4e-14
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 60 6e-10
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 57 3e-09
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 29 0.95
05_01_0090 + 598311-599597,599884-599997,600186-600450,600994-60... 28 1.7
04_03_0192 + 12474614-12474665,12475100-12475152,12475793-12476032 28 2.2
02_03_0122 - 15491106-15491509,15492668-15492695 28 2.2
10_08_0424 - 17803984-17805270 27 3.9
02_02_0415 - 9981345-9981440,9981716-9981784,9982035-9982155,998... 27 3.9
01_06_1224 - 35508842-35510404 27 3.9
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475... 27 5.1
10_08_0659 + 19647037-19647464,19647569-19647659,19648998-196490... 27 5.1
04_03_0302 + 14102477-14102963,14103011-14103057,14103432-14104073 27 5.1
01_06_0323 - 28476459-28476915,28477075-28477525,28477623-284779... 27 5.1
09_04_0530 + 18365154-18365200,18365231-18365762,18365836-183659... 26 6.7
06_01_0296 - 2156895-2157160,2157435-2157527,2157932-2158031,215... 26 6.7
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 26 6.7
02_01_0582 + 4315336-4315956,4316060-4316188,4316282-4316581 26 6.7
07_03_1636 + 28290642-28291574 26 8.9
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149... 26 8.9
01_07_0041 + 40688242-40688278,40688396-40688502,40688612-406887... 26 8.9
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 78.2 bits (184), Expect = 2e-15
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMI 167
+ + KINVHGGAVSLGHP+G SGARI+V L L K G+ GVA +CNGGGGAS++++
Sbjct: 339 LGIPSEKINVHGGAVSLGHPLGCSGARILVTLLGVLREKGGKIGVAGVCNGGGGASALVL 398
Query: 166 E 164
E
Sbjct: 399 E 399
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 73.3 bits (172), Expect = 4e-14
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMI 167
+ + K+N+ GG VSLGHPIG SGARI+V L L K G+ GVA +CNGGGGAS++++
Sbjct: 330 LGIPSGKLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKNGKIGVAGVCNGGGGASALVV 389
Query: 166 E 164
E
Sbjct: 390 E 390
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 59.7 bits (138), Expect = 6e-10
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSV 173
+ LDP+K+NV+GGA++LGHP+G +GAR V L + +K+ K GV S+C G G ++
Sbjct: 374 LGLDPAKVNVNGGAMALGHPLGATGARSVSTLLNEMKRRGKDCRFGVISMCIGSGMGAAA 433
Query: 172 MIEK 161
+ E+
Sbjct: 434 VFER 437
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 57.2 bits (132), Expect = 3e-09
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEK----GVASICNGGGGASSV 173
+ LD SK+NV+GGA++LGHP+G +GAR V L + +K+ + GV ++C G G ++
Sbjct: 372 LGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVTMCIGSGMGAAA 431
Query: 172 MIEK 161
+ E+
Sbjct: 432 VFER 435
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 207 EATPFSPFFKAWHRCTTMRAPDIPIG*PKLTAP 305
+ PF+ F W RC M P P+ PK AP
Sbjct: 168 DGCPFTMFAPFWDRCLCMPDPAAPLLPPKRIAP 200
>05_01_0090 +
598311-599597,599884-599997,600186-600450,600994-601109
Length = 593
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 307 GGAVSLGHPIGMSGARIVVHLCHA--LKKGEKGVASICNGGGGASSVM 170
GG S+GH + G H L +AS GGGG +SV+
Sbjct: 43 GGCNSIGHILSFDGRDAPAFAIHGVLLPSNPSTMASTGGGGGGGASVL 90
>04_03_0192 + 12474614-12474665,12475100-12475152,12475793-12476032
Length = 114
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 304 GAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSV 173
G + IG G+ + V A + G+KG A +C GG ++ V
Sbjct: 54 GGKNAATQIGGEGSDVRVLQAAAAQMGKKGAAHVCITGGSSTDV 97
>02_03_0122 - 15491106-15491509,15492668-15492695
Length = 143
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 265 ARIVVHLCHALKKGEKGVASICNGG 191
AR+ VHL H +K +GVA C GG
Sbjct: 2 ARLAVHLVHLRRKPARGVA--CGGG 24
>10_08_0424 - 17803984-17805270
Length = 428
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 102 SVLSRHSNDYTLHFMLSTYIFSIITD-DAPPPPLQIEATPFS 224
S+L RH + + L FS + D D PPPP TP S
Sbjct: 3 SLLRRHRHPHPLPAAHLLRRFSALPDVDHPPPPASTPTTPAS 44
>02_02_0415 -
9981345-9981440,9981716-9981784,9982035-9982155,
9982441-9982622,9983320-9984921
Length = 689
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 319 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSV 173
IN++ AV G +G ++++LC + G A N G G +S+
Sbjct: 197 INLYDSAVKEGIKMGQHHYSVLLYLCSSAALGFVQPAKSGNAGSGIASI 245
>01_06_1224 - 35508842-35510404
Length = 520
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 180 DAPPPPLQIEATPFSP 227
DAPPPP ++ P+SP
Sbjct: 13 DAPPPPPELSHPPYSP 28
>11_01_0596 +
4755453-4755490,4755675-4756047,4757739-4758940,
4759026-4759392
Length = 659
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 307 GGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGA 182
GGA SLG G G +C A + +++ GGGGA
Sbjct: 43 GGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGA 84
>10_08_0659 +
19647037-19647464,19647569-19647659,19648998-19649039,
19649179-19649237,19649559-19649634,19649735-19649866,
19650251-19650358,19651040-19651094,19651187-19651437
Length = 413
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 102 SVLSRHSNDYT--LHFMLSTYIFSIITDDAPPPPLQIEATPFSP 227
S+ SR S+ T LH + ++ + +DD P PP ++ P SP
Sbjct: 8 SLASRLSHHLTRRLHPATAPHLLASHSDDDPSPPPELPPFPHSP 51
>04_03_0302 + 14102477-14102963,14103011-14103057,14103432-14104073
Length = 391
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 305 WSCQFGSSNWYVWSSHCCTSVPCFKKRRKGSC 210
W CQ+ N+ H + CF +R + SC
Sbjct: 315 WVCQYNGLNFAECIHHFSSRTSCFTRRGEMSC 346
>01_06_0323 -
28476459-28476915,28477075-28477525,28477623-28477904,
28478089-28478118,28480560-28481433
Length = 697
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 226 GEKGVASICNGGGGASSVMI 167
G G+ IC+GGGG +VM+
Sbjct: 73 GYPGLEIICDGGGGGKAVMM 92
>09_04_0530 +
18365154-18365200,18365231-18365762,18365836-18365933,
18366026-18366271,18366615-18366729,18366844-18367057,
18367211-18367824
Length = 621
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 301 AVSLGH-PIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSV 173
+VSLG P G + + HA+++G V S N G GA +V
Sbjct: 118 SVSLGGAPAGYLRDGVAIGSFHAVRRGVTVVCSAGNSGPGAGTV 161
>06_01_0296 -
2156895-2157160,2157435-2157527,2157932-2158031,
2158634-2158738,2158832-2158972,2159056-2159568
Length = 405
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 180 DAPPPPLQIEATPFSPFFKAWHRC--TTMRAPDIP 278
D+PPPP A P P AW R PD+P
Sbjct: 73 DSPPPPAAAAAAPPPP--PAWRLAWLPPARVPDVP 105
>04_01_0422 +
5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = -1
Query: 307 GGAVSLGHPIGMSGA-RIVVHLCHALKK-----GEKGVASICNGGGGASSVMI 167
GG+++ H G G R+++ + E GV S+ GGG S+MI
Sbjct: 215 GGSMAADHQFGGDGGGRVMLRASEFMNVDGDVLAEGGVGSLKGGGGSGGSIMI 267
>02_01_0582 + 4315336-4315956,4316060-4316188,4316282-4316581
Length = 349
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 286 HPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM*VD 149
HPIG S A L L GE A+ +GGGG V ++ + D
Sbjct: 105 HPIGSSAAPPPDAL---LLGGENDAAAAVDGGGGGKEVKLDFLFAD 147
>07_03_1636 + 28290642-28291574
Length = 310
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 186 PPPPLQIEATPFSPFFKAWHRCTTMRAPDIPIG*P-KLTAPP 308
PPPP E P SP + +R P P P KL+ PP
Sbjct: 153 PPPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPP 194
>02_04_0220 -
21014225-21014386,21014492-21014572,21014739-21014938,
21014999-21015157,21015248-21015377,21015520-21015673,
21015785-21015867,21015981-21016040,21016131-21016217
Length = 371
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -2
Query: 297 SVWVIQLVCLELALLYICAML 235
S+W + +V +E+ LL++C M+
Sbjct: 272 SLWKLNIVDIEVTLLHVCEMV 292
>01_07_0041 +
40688242-40688278,40688396-40688502,40688612-40688707,
40688859-40688915,40689033-40689194,40689310-40689394,
40689648-40689738,40689813-40689977,40690121-40690240,
40690330-40690402,40690482-40690650,40690741-40691651,
40691839-40691931,40692065-40692255,40692343-40692455,
40692757-40692783,40693915-40693949
Length = 843
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 183 APPPPLQIEATPFSPFFKAWHRC 251
APPPP Q +T + + WH C
Sbjct: 2 APPPPPQGSSTGDPLYDELWHAC 24
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,681,588
Number of Sequences: 37544
Number of extensions: 181679
Number of successful extensions: 695
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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