Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N22
(343 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 97 4e-21
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 87 3e-18
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 83 4e-17
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 60 3e-10
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 53 5e-08
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.071
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.071
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 0.38
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 0.38
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 0.38
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 0.38
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 0.38
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 1.5
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 1.5
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 1.5
Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical pr... 27 2.7
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 27 2.7
Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical pr... 27 3.5
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 27 4.7
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 27 4.7
U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in ge... 26 6.1
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 26 6.1
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 26 6.1
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 26 6.1
Z73976-3|CAA98286.1| 179|Caenorhabditis elegans Hypothetical pr... 26 8.1
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 26 8.1
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 96.7 bits (230), Expect = 4e-21
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEK 161
+ +DPS +N HGGAVS+GHPIGMSGAR++ HL H LK G+ GVA+ICNGGGG+S ++I+K
Sbjct: 347 LGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKSGQIGVAAICNGGGGSSGMVIQK 406
Query: 160 M 158
+
Sbjct: 407 L 407
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 87.0 bits (206), Expect = 3e-18
Identities = 34/61 (55%), Positives = 50/61 (81%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEK 161
+ +DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C+G GG+S ++I+K
Sbjct: 400 LGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALCDGDGGSSGMVIQK 459
Query: 160 M 158
+
Sbjct: 460 L 460
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 83.4 bits (197), Expect = 4e-17
Identities = 35/61 (57%), Positives = 51/61 (83%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEK 161
+N++PS +NV GGAV++GHP+GMSG RIV L ++L G+ GVA+ICNGGG A++V+I+K
Sbjct: 330 LNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAVLIKK 389
Query: 160 M 158
+
Sbjct: 390 L 390
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 60.5 bits (140), Expect = 3e-10
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMI 167
+ + K+NV+GGA++LGHP+ SGARI H+ H L + + G+ S C GGG +++
Sbjct: 332 LGIPMEKLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILF 391
Query: 166 EKM 158
EK+
Sbjct: 392 EKV 394
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 53.2 bits (122), Expect = 5e-08
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = -1
Query: 322 KINVHGGAVSLGHPIGMSGARIVVHLCHALK--KGEKGVASICNGGGGASSVMIE 164
K+N+ GG++S+GHP G +G R+ H H LK KG+ V + C GG ++IE
Sbjct: 390 KLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 319 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 197
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 319 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 197
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 STYIFSIITDDAPPPPLQIEATPFSPFFK 236
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 STYIFSIITDDAPPPPLQIEATPFSPFFK 236
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 STYIFSIITDDAPPPPLQIEATPFSPFFK 236
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 STYIFSIITDDAPPPPLQIEATPFSPFFK 236
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 STYIFSIITDDAPPPPLQIEATPFSPFFK 236
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 314 CTWWSCQFGSSNWYVWSSHC 255
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 314 CTWWSCQFGSSNWYVWSSHC 255
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 314 CTWWSCQFGSSNWYVWSSHCCTSV 243
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
>Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical
protein C14C10.7 protein.
Length = 143
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 207 EATPFSPFFKAWHRCTTMRAP 269
E TP P FK +H C R P
Sbjct: 78 ETTPIDPVFKIYHDCNDERLP 98
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 141 NVKYSHCCACLXHCFKYF 88
N+ S CC+C H F YF
Sbjct: 479 NMMRSRCCSCFGHFFLYF 496
>Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical
protein Y70C5C.4 protein.
Length = 327
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 314 CTWWSCQFGSSNWYVWSSHCCTSVPC 237
CTW F S +Y S+H +S+ C
Sbjct: 2 CTWRDSYFESVEFYKQSTHILSSIQC 27
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 296 QFGSSNWYVWSSHCCTSVPCFKKRRKGSCFNL*WRRWC 183
Q +S+ VW S C CF+ G F R++C
Sbjct: 33 QMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYC 70
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 296 QFGSSNWYVWSSHCCTSVPCFKKRRKGSCFNL*WRRWC 183
Q +S+ VW S C CF+ G F R++C
Sbjct: 33 QMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYC 70
>U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform b protein.
Length = 603
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Frame = +3
Query: 99 NSVLSRHS----NDYTLHFMLSTY 158
N +L R S N++TLHF LSTY
Sbjct: 256 NEILFRESPAPENNFTLHFTLSTY 279
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Frame = +3
Query: 99 NSVLSRHS----NDYTLHFMLSTY 158
N +L R S N++TLHF LSTY
Sbjct: 256 NEILFRESPAPENNFTLHFTLSTY 279
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 314 CTWWSCQFGSSNWYVWSSHCCTSVPCFK--KRRKGSCF 207
C SC+ + W WS SV C + + RK +CF
Sbjct: 756 CVMQSCRENKNTWTEWSQWSDCSVNCGEGVQFRKRACF 793
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 340 MNLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEK 161
+ L + +V V+L + + G VH+ A + KG + G GG+ S +EK
Sbjct: 349 LGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLEK 408
>Z73976-3|CAA98286.1| 179|Caenorhabditis elegans Hypothetical
protein T07C12.7 protein.
Length = 179
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 207 EATPFSPFFKAWHRC 251
E TP P FK +H+C
Sbjct: 75 ELTPIDPVFKVYHKC 89
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 280 IGMSGARIVVHLCHALKKGEKGVASICNGGGGASS--VMIEKM 158
+G A + +L + E+ V +CN GGG S+ V+IE +
Sbjct: 1034 MGPKDAEEIRYLLKLVTDSERPVFVVCNTGGGRSAAFVLIESL 1076
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,504,207
Number of Sequences: 27780
Number of extensions: 143143
Number of successful extensions: 427
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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