Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_N18
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-16|CAB60995.1|  418|Caenorhabditis elegans Hypothetical p...   102   3e-22
U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z81094-2|CAB03156.1|  770|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z81094-1|CAB03150.1|  784|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF039048-7|AAB94234.2|  688|Caenorhabditis elegans Hypothetical ...    29   4.6  

>Z49909-16|CAB60995.1|  418|Caenorhabditis elegans Hypothetical
           protein C14A4.14 protein.
          Length = 418

 Score =  102 bits (244), Expect = 3e-22
 Identities = 55/169 (32%), Positives = 88/169 (52%)
 Frame = -2

Query: 739 YLFTDITFGIAXXXXXXXXRDTDGTLRSCDHDIXKKLNQVYFPITGRXIREPHMFSDEEK 560
           ++FTDITF           R+ DGTLR+ + +   ++N+ Y+    R +  P +FSD   
Sbjct: 130 FVFTDITFDATDQDRTVVVREPDGTLRTANPEEHDRMNRTYYQKPNRSVNPPPLFSDPN- 188

Query: 559 FHNLLDRGEYEFVLDRACIXYEPDEPIFQXITSITYQHVDNNKCYXTLRSTRHFGSMTFY 380
             N LD+ ++EFVLD AC  YEPD+P +  ++ + +  ++ +  +  + STRHFG  TFY
Sbjct: 189 LQNALDKNDHEFVLDWACWFYEPDDPAYVRLSQLVFDRINESGKFHVVTSTRHFGPFTFY 248

Query: 379 LTWHQSIDNLMLEIIQSGFIREAVLLAAXRHDVHNDVREGTAAQSLAQE 233
           L  + +I  L+      G + +   L   +  V  D R  T AQ  + E
Sbjct: 249 LALNDNIQKLLNYFGGLGRLSDCANLVRLQKAVRPDWRV-TIAQGDSDE 296


>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 14/57 (24%), Positives = 32/57 (56%)
 Frame = -2

Query: 499 YEPDEPIFQXITSITYQHVDNNKCYXTLRSTRHFGSMTFYLTWHQSIDNLMLEIIQS 329
           +E  +P+FQ   S  +  + +N     LR T+   S+  +++WH S+   +++++Q+
Sbjct: 407 FETSDPLFQYCYS--HSTMIDNSIQDLLRDTQTASSLPQHISWHSSVTPEIVQLVQT 461


>Z81094-2|CAB03156.1|  770|Caenorhabditis elegans Hypothetical
           protein F58G11.1b protein.
          Length = 770

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -2

Query: 310 VLLAAXRHDVHNDVREGTAAQSLAQEIFTTPXXXXXXXXLTEEDIQLDSKCIQCIEKYIV 131
           V   A  H++  D+ +  A+ S   E               +EDI +D K +  IE+ IV
Sbjct: 455 VAAQAIVHELKKDIYDAVASTSSTTEAKEPAAKPSEAKEEKKEDITVDKKDLSHIEEIIV 514

Query: 130 SNSTIKSQHELALQGFKED-FQHRAEL 53
                +++H++   G +E   +H+ +L
Sbjct: 515 GGPIKEAKHDIL--GLREKVLEHKEDL 539


>Z81094-1|CAB03150.1|  784|Caenorhabditis elegans Hypothetical
           protein F58G11.1a protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -2

Query: 310 VLLAAXRHDVHNDVREGTAAQSLAQEIFTTPXXXXXXXXLTEEDIQLDSKCIQCIEKYIV 131
           V   A  H++  D+ +  A+ S   E               +EDI +D K +  IE+ IV
Sbjct: 455 VAAQAIVHELKKDIYDAVASTSSTTEAKEPAAKPSEAKEEKKEDITVDKKDLSHIEEIIV 514

Query: 130 SNSTIKSQHELALQGFKED-FQHRAEL 53
                +++H++   G +E   +H+ +L
Sbjct: 515 GGPIKEAKHDIL--GLREKVLEHKEDL 539


>Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical
           protein F14B4.3 protein.
          Length = 1127

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 583 HMFSDEEKFHNLLDRGEYEFVLDRA-CIXYEPDEPIFQ 473
           H+ SDEEKFH L    +    L +  C    PD P FQ
Sbjct: 307 HLDSDEEKFHTLAYMTQKLIALVKGECAPETPDNPQFQ 344


>AF039048-7|AAB94234.2|  688|Caenorhabditis elegans Hypothetical
           protein F16B4.3 protein.
          Length = 688

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 184 EDIQLDSKCIQCIEKYIVSNSTIKSQHELALQGFKE 77
           E ++L +KCI C E+ I+S   +    + AL+  KE
Sbjct: 445 EALELSAKCIHCKEETILSKENLIEYIDEALENTKE 480


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,862,518
Number of Sequences: 27780
Number of extensions: 273831
Number of successful extensions: 579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)