Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N15
(707 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 117 1e-26
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 87 1e-17
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 83 2e-16
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 79 3e-15
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 76 2e-14
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 74 1e-13
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 65 5e-11
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 62 6e-10
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 34 0.13
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 32 0.39
07_01_0067 + 490614-490796,491194-491358 32 0.39
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 3.6
02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 29 3.6
03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 29 4.8
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 4.8
01_05_0513 - 22864657-22867899 29 4.8
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 6.3
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 28 8.4
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 117 bits (281), Expect = 1e-26
Identities = 64/188 (34%), Positives = 100/188 (53%)
Frame = -3
Query: 678 YEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXGQWG 499
Y +G LE D+ TSG ++L ++ R E +D + G
Sbjct: 112 YHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLG 171
Query: 498 TDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKV 319
TDE F I RS+ + + + Y + + +E +K E SG+ E +L I +C ++
Sbjct: 172 TDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCAENPA 231
Query: 318 GFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDF 139
+FA+ L SMKG+GT+D TLIR+VV+R+EID+ IK + +KY KSL I +T G++
Sbjct: 232 KYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNY 291
Query: 138 KRVLLTLV 115
+ LL+LV
Sbjct: 292 RTFLLSLV 299
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/117 (23%), Positives = 55/117 (47%)
Frame = -3
Query: 693 TISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXX 514
++++ Y +Y +SLE +K +TSG+F+ +++ EN
Sbjct: 191 SVASAYHHMYDRSLEKVVKSETSGNFELALLTILRC--AENPA-------KYFAKVLRKS 241
Query: 513 XGQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 343
GTD+S +++TR+ ++ I AEY K + ++I E SG+ +L++
Sbjct: 242 MKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 249 IVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRVLLTLV 115
I+ SR+ L +KQ + K+G LE I T GD +++LL V
Sbjct: 96 IICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYV 140
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 87.4 bits (207), Expect = 1e-17
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Frame = -3
Query: 678 YEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXGQ-W 502
Y + + +SLE D+ +G F++L V L A R E ++ + +
Sbjct: 127 YHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYEGPEVNTKLAHSEAKILHEKIQHKAY 186
Query: 501 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 322
G DE I IL TRS QL F Y G I +K + + AI +C
Sbjct: 187 GDDEII--RILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCFCCP 244
Query: 321 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGD 142
+F + + ++ G+GT++ +L RI+ +R+E+DL I +A+ ++ LE +A DT GD
Sbjct: 245 DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGD 304
Query: 141 FKRVLLTLVS*E 106
++R+LL L+ E
Sbjct: 305 YERMLLALLGQE 316
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/131 (29%), Positives = 65/131 (49%)
Frame = -3
Query: 504 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 325
WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVILWTLDPAE 86
Query: 324 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKG 145
+ A + G+ + L+ I +R L ++QA+ E++ +SLE +A G
Sbjct: 87 RDAVLANEVARKWYP-GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATG 145
Query: 144 DFKRVLLTLVS 112
DF+++L+ L+S
Sbjct: 146 DFRKLLVPLIS 156
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = -3
Query: 306 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRVL 127
++L + +G GTN+ +I I+ R I++A+ + YG+ L I D+ GDF+R +
Sbjct: 18 DQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAV 77
Query: 126 L 124
+
Sbjct: 78 I 78
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/93 (39%), Positives = 62/93 (66%)
Frame = -3
Query: 393 SIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGD 214
++K E SG+ G+L I +C +S +FA+ L+ +MKG+GTND TLIR+V +R+E+D+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 213 IKQAFLEKYGKSLETWIADDTKGDFKRVLLTLV 115
IK + Y +SL + +T G+++ LL+L+
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYRTFLLSLI 342
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 309 AERLYYS-MKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLE 172
A LY + + +GT+++T IR+ RS + + A+ Y +SLE
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = -3
Query: 501 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 343
GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++
Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 79.4 bits (187), Expect = 3e-15
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Frame = -3
Query: 678 YEQLYGKSLESDLKGDTSGHFKR-LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXGQW 502
Y + K+LE D+ + S ++R L V+L +++ + +
Sbjct: 124 YLARFKKNLEQDMVTEPSHPYQRQLLVALATSHKSHHDELSRHIAKCDARRLYDAKNSGM 183
Query: 501 GT-DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 325
G+ DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+ +
Sbjct: 184 GSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCIYN 243
Query: 324 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADD-TK 148
+F++ L+ S++ TN + + R ++ ++D+ IK F YGK LE +I + +
Sbjct: 244 PSMYFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYGKDLEDFILESLPE 303
Query: 147 GDFKRVLL 124
D++ LL
Sbjct: 304 NDYRDFLL 311
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 76.2 bits (179), Expect = 2e-14
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Frame = -3
Query: 696 RTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXX 517
R I Y + YG+ L L + G F+ L V L R + ++
Sbjct: 47 RAIRRAYAEAYGEELLRALNDEIHGKFE-LLVPLVTVYRYDGPEVNTSLAHSEAKILHEK 105
Query: 516 XXGQWGTDESIFNSILITRSYQQLRQIFAEYEALTG----KDIEDSIKKEFSGSIEKGML 349
+ +D+ I IL TRS QL F Y G KD++ K EF G++
Sbjct: 106 IHDKAYSDDEIIR-ILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLR---- 160
Query: 348 AIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLET 169
AI +C +F + + ++ G+GT++ +L RI+ +R+E+DL IK+A+ ++ LE
Sbjct: 161 AIIRCFTCPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLER 220
Query: 168 WIADDTKGDFKRVLLTLVS*E 106
+A DT D++ +LL L+ E
Sbjct: 221 AVAKDTTRDYEDILLALLGAE 241
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = -3
Query: 306 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRVL 127
E+L + KG GTN+K +I I+ R I++A+ E YG+ L + D+ G F+ +L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LL 76
Query: 126 LTLVS 112
+ LV+
Sbjct: 77 VPLVT 81
Score = 37.5 bits (83), Expect = 0.010
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Frame = -3
Query: 504 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE--KGMLAIAKCV 331
WGT+E + SIL R Q R I Y G+++ ++ E G E ++ + +
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLVPLVTVYRYD 86
Query: 330 KSKVGFF-----AERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETW 166
+V A+ L+ + +D +IRI+ +RS+ L ++ +++G +
Sbjct: 87 GPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFGHPITKD 146
Query: 165 IADDTKGDFKRVLLTLV 115
+ D K +F L ++
Sbjct: 147 LKADPKDEFLGTLRAII 163
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/132 (33%), Positives = 67/132 (50%)
Frame = -3
Query: 501 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 322
G DE + I+ TRS QLR F Y G DI + I G + + C+ S
Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSP 231
Query: 321 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGD 142
FAE + +S+ G+GT + L R++VSR+EID+ I++ + +Y ++ + DT
Sbjct: 232 EKHFAEVIRHSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRYKTTVTRDVVGDTSFG 291
Query: 141 FKRVLLTLVS*E 106
+K LL LV E
Sbjct: 292 YKGFLLALVGRE 303
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 65.3 bits (152), Expect = 5e-11
Identities = 38/123 (30%), Positives = 63/123 (51%)
Frame = -3
Query: 474 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 295
I+ TRS QL Y GK I++ + + + A C+ S FAE +
Sbjct: 246 IVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIR 305
Query: 294 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRVLLTLV 115
S+ G+GT+++ L R +VSR+E+D+ +K+ + +Y ++ + DT G + LLTLV
Sbjct: 306 TSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLTLV 365
Query: 114 S*E 106
E
Sbjct: 366 GPE 368
Score = 45.6 bits (103), Expect = 4e-05
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Frame = -3
Query: 504 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 325
WGTDE+ IL R+ Q +I YE L + + D + E SG ++ +
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALMLWTMDPAA 132
Query: 324 KVGFFA-ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIAD-DT 151
+ A E L KG + L+ + + S L +++A+ Y SLE +A
Sbjct: 133 RDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASSLEEDVASCSL 192
Query: 150 KGD-FKRVLLTLVS 112
GD +R L+ LVS
Sbjct: 193 FGDPLRRFLVRLVS 206
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 61.7 bits (143), Expect = 6e-10
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = -3
Query: 498 TDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIA-KCVKSK 322
TD I+ TRS QL F+ + G I +++ + L A +C+
Sbjct: 157 TDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPTGYSHALRTALRCISDA 216
Query: 321 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGD 142
+F + L +M GTN+ +L R++V +E DL IK AF ++ +LE I +DT GD
Sbjct: 217 NKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKRASVALEKAIGNDTSGD 276
Query: 141 FKRVLLTLV 115
+K L+ L+
Sbjct: 277 YKSFLMALL 285
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 504 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 352
WGTDE +L R Q +QI YE +++ ++ E SG +E+ M
Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 309 AERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRV 130
A+ L + +G GT+++ +I ++ R I+ + E Y ++L + + GD +R
Sbjct: 17 ADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERA 76
Query: 129 LL--TLVS*EHNNKTTNVSSNCL 67
+ L E N ++ C+
Sbjct: 77 MYHWVLDPVERQAVMVNTATKCI 99
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = -2
Query: 424 RSFDRKRH*GLDQERILW*H*EGHARYCQMRKEQGRFLR*APVLLDEGHRHQRQDAHPHR 245
R DR R G D ER GH R+ + +++ R A D GH H+R DA
Sbjct: 367 RDRDRDRDRGRDYERD---RDRGHDRHRERGRDRERDYERASHERDRGHMHER-DAEFAN 422
Query: 244 GEPLRDRPRGH 212
GEP D+ G+
Sbjct: 423 GEPKHDQEYGY 433
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 258 LIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTKGDFKRVLLTLV 115
L+ +V +R ++ I+QA+ +Y SLE ++ T G VLL +
Sbjct: 127 LVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFL 174
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = -3
Query: 699 IRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQG--IDXXXXXXXXXXX 526
+ I Y+ Y SLE D+ TSG + ++ ++ G +D
Sbjct: 139 VALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFLGSSGSGYHGGRVDATMAMCDAKTL 198
Query: 525 XXXXXGQWG-TDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKE 379
D+ +L RS QLR + A Y L G+++ ++K++
Sbjct: 199 YEAVEISAARVDQRSVLQLLRHRSGDQLRAVLASYRRLYGQELARALKRK 248
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = -3
Query: 495 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 316
D + ++ TR ++ I Y+A +E + SGS+ + +LA S G
Sbjct: 123 DGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFLG--SSGSG 180
Query: 315 FFAERLYYSMKGIGTNDKTLIRIV-VSRSEIDLGDIKQAFLEKYGKSLETWIA 160
+ R+ +M + KTL V +S + +D + Q + G L +A
Sbjct: 181 YHGGRVDATM--AMCDAKTLYEAVEISAARVDQRSVLQLLRHRSGDQLRAVLA 231
>07_01_0067 + 490614-490796,491194-491358
Length = 115
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2
Query: 232 RDRPRGHQAGIPREVRQVPGDLDR*RYERRLQTRV 128
RDRP G+P++VR D++R RY+ +L TRV
Sbjct: 36 RDRPSLKIRGVPKDVRSC--DVERVRYKEQLSTRV 68
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 304 APVLLDEGHRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 179
AP+L H H H H E + G + +P +VR V
Sbjct: 283 APLLQPHSHSHSHPHGHGHGHELAQPEGSGGEGEVPAQVRSV 324
>02_02_0440 -
10273032-10273259,10273423-10273461,10273875-10274123,
10274203-10274329,10275009-10275251,10275359-10275457,
10275566-10275681,10275813-10276039,10276164-10276276,
10276402-10276522,10276641-10276855,10277042-10277225,
10277739-10278048,10278155-10278249,10278473-10278485
Length = 792
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 188 YFSRNACLMSPRSISERLTTMRMSVLS 268
YF AC+ P SERL R+SVL+
Sbjct: 519 YFLAAACIFEPNRASERLAWARVSVLA 545
>03_05_0078 +
20555296-20555560,20555643-20555887,20555947-20556180,
20556451-20556537,20556624-20556959,20557057-20557194,
20557231-20557311,20557392-20557480,20557750-20557813,
20557896-20557985,20558064-20558186
Length = 583
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 47 HNSYTLKRQLLETFVVLLLCSYETRVSNTRLKSPFVSSAIQVSR----DLPYFSRNACLM 214
H K+ + +FV L +T + +SSA R +PY NA +
Sbjct: 456 HEHMIAKQSSIGSFVEGLKLVRDTWNQLWHMTMELISSANANGRRFNPSIPYERTNAKQL 515
Query: 215 SPRSISERLTTMRMSVLSLVP 277
S S+ +R T +M+V S+VP
Sbjct: 516 SEESLGKRSRTSQMNVKSMVP 536
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 280 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 179
H H R H HR + +R G AG ++ R+V
Sbjct: 138 HSHHRHGGHHHRSDSVRGGGTGATAGSDKDGREV 171
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -2
Query: 280 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQVPGDLDR*RYERRL 140
H+HQ P EP P G +AG P EVR+ +R R R L
Sbjct: 257 HQHQHPQPQPEP-EP-EPEPDGGEAGYPPEVRKTRMATERVRIARHL 301
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 524 PPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 399
P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -3
Query: 333 VKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 181
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 412 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSNEMEQLGYLKQAKGKKASK 461
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,766,178
Number of Sequences: 37544
Number of extensions: 356882
Number of successful extensions: 1080
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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