Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N14
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 258 2e-69
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 54 1e-07
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 54 1e-07
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 54 1e-07
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 31 1.2
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 31 1.2
U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect... 29 3.5
U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect... 29 3.5
U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein. 29 3.5
AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical ... 29 4.7
U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase prote... 28 6.2
AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase pro... 28 6.2
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 258 bits (633), Expect = 2e-69
Identities = 118/159 (74%), Positives = 133/159 (83%)
Frame = -1
Query: 751 IYAIGDVIHGPMXAHKAEDEGIVCVEGIKGMPVHFNYDAIPSVIYTSPEVGWVGKTEEDL 572
I+AIGDVI GPM AHKAEDEGI+CVEGI G PVH +Y+ +PSV+YT PEV WVGK EE L
Sbjct: 335 IFAIGDVIEGPMLAHKAEDEGILCVEGIAGGPVHIDYNCVPSVVYTHPEVAWVGKAEEQL 394
Query: 571 KKEGRAYKVGKFPFLANSRAKTNGETEGFVKVLSDKTTDVILGTHIIGPGGGELINEAVL 392
K+EG AYK+GKFPF+ANSRAKTN + EGFVKVL+DK TD +LG HIIGP GE+I EA L
Sbjct: 395 KQEGVAYKIGKFPFVANSRAKTNNDQEGFVKVLADKQTDRMLGVHIIGPNAGEMIAEATL 454
Query: 391 AQEYGAAAEDVARVCHAHPTCAEALREANLAAYSGKPIN 275
A EYGA+AEDVARVCH HPT +EA REANLAAY GK IN
Sbjct: 455 AMEYGASAEDVARVCHPHPTLSEAFREANLAAYCGKAIN 493
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Frame = -1
Query: 751 IYAIGDVIHG-PMXAHKAEDEGIVCVEGI-KGMPVHFNYDAIPSVIYTSPEVGWVGKTEE 578
+YAIGDV+ G P A G V + I G YD IP+ ++T E G G +EE
Sbjct: 495 VYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEE 554
Query: 577 D-LKKEGRAYKV---GKFPFLANSRAKTNGETEGFVKVLSDKTTDV-ILGTHIIGPGGGE 413
D + K G+ + F L + ++ + ++K++ + + ++G HI+ P GE
Sbjct: 555 DAMMKYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGE 614
Query: 412 LINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 287
+ +A + A D R+ HPT AE L G
Sbjct: 615 VTQGFGIALKLAAKKADFDRLIGIHPTVAENFTTLTLEKKEG 656
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Frame = -1
Query: 751 IYAIGDVIHG-PMXAHKAEDEGIVCVEGI-KGMPVHFNYDAIPSVIYTSPEVGWVGKTEE 578
+YAIGDV+ G P A G V + I G YD IP+ ++T E G G +EE
Sbjct: 353 VYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEE 412
Query: 577 D-LKKEGRAYKV---GKFPFLANSRAKTNGETEGFVKVLSDKTTDV-ILGTHIIGPGGGE 413
D + K G+ + F L + ++ + ++K++ + + ++G HI+ P GE
Sbjct: 413 DAMMKYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGE 472
Query: 412 LINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 287
+ +A + A D R+ HPT AE L G
Sbjct: 473 VTQGFGIALKLAAKKADFDRLIGIHPTVAENFTTLTLEKKEG 514
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Frame = -1
Query: 751 IYAIGDVIHG-PMXAHKAEDEGIVCVEGI-KGMPVHFNYDAIPSVIYTSPEVGWVGKTEE 578
+YAIGDV+ G P A G V + I G YD IP+ ++T E G G +EE
Sbjct: 495 VYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEE 554
Query: 577 D-LKKEGRAYKV---GKFPFLANSRAKTNGETEGFVKVLSDKTTDV-ILGTHIIGPGGGE 413
D + K G+ + F L + ++ + ++K++ + + ++G HI+ P GE
Sbjct: 555 DAMMKYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGE 614
Query: 412 LINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 287
+ +A + A D R+ HPT AE L G
Sbjct: 615 VTQGFGIALKLAAKKADFDRLIGIHPTVAENFTTLTLEKKEG 656
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 49.2 bits (112), Expect = 3e-06
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Frame = -1
Query: 751 IYAIGDVIHGPMXAHK-AEDEGIVCVEGIKGMPVHF-NYDAIPSVIYTSPEVGWVGKTEE 578
+YA+GD++ A G + + + +D + + ++T E+ VG TEE
Sbjct: 332 VYAVGDIVQDRQELTPLAIQSGKLLADRLFSNSKQIVRFDGVATTVFTPLELSTVGLTEE 391
Query: 577 D-LKKEGR-AYKVGKFPFLANSRAKTNGETEGFVKVLSDKTTDV---ILGTHIIGPGGGE 413
+ ++K G + +V F + GF V + T D ILG H +GP E
Sbjct: 392 EAIQKHGEDSIEVFHSHFTPFEYVVPQNKDSGFCYVKAVCTRDESQKILGLHFVGPNAAE 451
Query: 412 LINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSGK 284
+I +A G + D+ HP +E + ++ SG+
Sbjct: 452 VIQGYAVAFRVGISMSDLQNTIAIHPCSSEEFVKLHITKRSGQ 494
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = -1
Query: 643 YDAIPSVIYTSPEVGWVGKTE-EDLKKEGR-AYKVGKFPFLANSRAKTNGETEGFVKVLS 470
Y+ I +V+++ P +G VG TE E ++K G+ + K F A T + + +K++
Sbjct: 339 YENIATVVFSHPLIGTVGLTEAEAVEKYGKDEVTLYKSRFNPMLFAVTKHKEKAAMKLVC 398
Query: 469 DKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEAL 317
+ ++G H+ G G E++ +A GA + + HPT AE L
Sbjct: 399 VGKDEKVVGVHVFGVGSDEMLQGFAVAVTMGATKKQFDQTVAIHPTSAEEL 449
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = -1
Query: 643 YDAIPSVIYTSPEVGWVGKTE-EDLKKEGR-AYKVGKFPFLANSRAKTNGETEGFVKVLS 470
Y+ I +V+++ P +G VG TE E ++K G+ + K F A T + + +K++
Sbjct: 353 YENIATVVFSHPLIGTVGLTEAEAVEKYGKDEVTLYKSRFNPMLFAVTKHKEKAAMKLVC 412
Query: 469 DKTTDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEAL 317
+ ++G H+ G G E++ +A GA + + HPT AE L
Sbjct: 413 VGKDEKVVGVHVFGVGSDEMLQGFAVAVTMGATKKQFDQTVAIHPTSAEEL 463
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical protein
C12C8.3b protein.
Length = 1143
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 608 G*SVNNRRNCIVVEVDGHALNTFDADDTFVLRFVSXHWSVNY 733
G + N+ N +V + D H + FD + F+L+F +V Y
Sbjct: 893 GITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGY 934
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical protein
C12C8.3a protein.
Length = 1147
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 608 G*SVNNRRNCIVVEVDGHALNTFDADDTFVLRFVSXHWSVNY 733
G + N+ N +V + D H + FD + F+L+F +V Y
Sbjct: 897 GITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGY 938
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 608 G*SVNNRRNCIVVEVDGHALNTFDADDTFVLRFVSXHWSVNY 733
G + N+ N +V + D H + FD + F+L+F +V Y
Sbjct: 897 GITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGY 938
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 608 G*SVNNRRNCIVVEVDGHALNTFDADDTFVLRFVSXHWSVNY 733
G + N+ N +V + D H + FD + F+L+F +V Y
Sbjct: 893 GITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGY 934
>U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect
sterile protein3, isoform b protein.
Length = 700
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -1
Query: 700 EDEGIVCVE-GIKGMPVHFNYDAIPSVIYTSPEVGWVGKTEEDLKKEGRAYKV----GKF 536
+++ + C+E GI +P+ +PS+ Y S V + T +LKK Y K
Sbjct: 190 DNDSVTCIENGISVIPMANR--TLPSISYNSSNVKNITLTGPELKKAKNVYLAVIVKRKT 247
Query: 535 PFLANSRAKTNGET 494
P L +R T G++
Sbjct: 248 PKLGENRVGTRGKS 261
>U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect
sterile protein3, isoform a protein.
Length = 754
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -1
Query: 700 EDEGIVCVE-GIKGMPVHFNYDAIPSVIYTSPEVGWVGKTEEDLKKEGRAYKV----GKF 536
+++ + C+E GI +P+ +PS+ Y S V + T +LKK Y K
Sbjct: 190 DNDSVTCIENGISVIPMANR--TLPSISYNSSNVKNITLTGPELKKAKNVYLAVIVKRKT 247
Query: 535 PFLANSRAKTNGET 494
P L +R T G++
Sbjct: 248 PKLGENRVGTRGKS 261
>U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein.
Length = 754
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -1
Query: 700 EDEGIVCVE-GIKGMPVHFNYDAIPSVIYTSPEVGWVGKTEEDLKKEGRAYKV----GKF 536
+++ + C+E GI +P+ +PS+ Y S V + T +LKK Y K
Sbjct: 190 DNDSVTCIENGISVIPMANR--TLPSISYNSSNVKNITLTGPELKKAKNVYLAVIVKRKT 247
Query: 535 PFLANSRAKTNGET 494
P L +R T G++
Sbjct: 248 PKLGENRVGTRGKS 261
>AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical
protein Y82E9BR.7 protein.
Length = 536
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 32 KYHILGKLASQLMIS*ITVCSFNAIKYSCNNLL 130
+Y + GK+ L +S + C+ + SCNN+L
Sbjct: 483 EYGLCGKVLLSLKLSSLLQCACTVVSVSCNNML 515
>U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase protein
2 protein.
Length = 585
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -2
Query: 591 ERLKKI*RKKAELT---KWV--NSRSWRTPERRRMGKLKVSSKCFPIR 463
E L+K+ +++ L+ KWV N WRT R K V S CF ++
Sbjct: 449 EGLRKVGQEELALSLVEKWVQKNFNMWRTSGGRMFEKYNVVSPCFKVK 496
>AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase
protein.
Length = 585
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -2
Query: 591 ERLKKI*RKKAELT---KWV--NSRSWRTPERRRMGKLKVSSKCFPIR 463
E L+K+ +++ L+ KWV N WRT R K V S CF ++
Sbjct: 449 EGLRKVGQEELALSLVEKWVQKNFNMWRTSGGRMFEKYNVVSPCFKVK 496
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,335,318
Number of Sequences: 27780
Number of extensions: 337146
Number of successful extensions: 910
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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