Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N14
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.33
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.33
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.3
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 7.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.3
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.3
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 524 ELQSEDEWGN*RFRQSAFR*DYRRNPWDSHHW 429
ELQSE+ G + S RRNPW S +W
Sbjct: 254 ELQSENIPGFDDYMASLTPDTNRRNPWFSEYW 285
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 524 ELQSEDEWGN*RFRQSAFR*DYRRNPWDSHHW 429
ELQSE+ G + S RRNPW S +W
Sbjct: 344 ELQSENIPGFDDYMASLTPDTNRRNPWFSEYW 375
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 173 FERNRATYVFKYKAQVNYY 117
FERNR + +K +VN+Y
Sbjct: 291 FERNRLQLLESFKRKVNFY 309
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 413 LTTARANDVSPKDYVCSLIGKHFDETFSFPIRL 511
+T +R+++++PK+ + GKH F +RL
Sbjct: 1 MTGSRSSEINPKEGLYDEGGKHTVHWFRKGLRL 33
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 399 LYSRRSMVPLLKTLRESVTRILHVPKRCVKQI*QRTPENLSTSK 268
+Y R+ VPL K + + + PK KQ Q+ L S+
Sbjct: 318 IYRRKKTVPLKKVNSKYILKSTLTPKLARKQF-QKNTTGLERSR 360
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 434 DVSPKDYVCSLIGKHFDETFSFPIRLRS 517
++ K Y C L K FD+ + LRS
Sbjct: 56 NIEEKTYQCLLCQKAFDQKNLYQSHLRS 83
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 71 SLIVTPVCLVCDIYLY 24
S IV PVC VC +Y
Sbjct: 408 SRIVFPVCFVCFNLMY 423
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 71 SLIVTPVCLVCDIYLY 24
S IV PVC VC +Y
Sbjct: 408 SRIVFPVCFVCFNLMY 423
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 474 STLTKPSVSPFVFALEFARNG 536
S +T+PS S + LE RNG
Sbjct: 194 SQMTEPSSSTKSYVLEGPRNG 214
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 9.3
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = -2
Query: 726 TDQXWLTKRRTKVSSASKVLRACPS---TSTTMQFRRLFTL--HPKLAGSERL 583
T + W+ + TK A+ ++ P T T R F L +PK++ + L
Sbjct: 512 TIKEWIERGTTKSMEAANIMSKLPKTVRTPTDSYIRSFFELLQNPKVSNEQFL 564
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 71 SLIVTPVCLVCDIYLY 24
S IV PVC VC +Y
Sbjct: 346 SRIVFPVCFVCFNLMY 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,850
Number of Sequences: 438
Number of extensions: 4447
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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