Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N06
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 54 8e-08
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 33 0.29
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 33 0.29
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 31 0.89
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 31 0.89
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 6.3
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 54.4 bits (125), Expect = 8e-08
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Frame = -2
Query: 742 DFEGRNPEDSDFHGIKQLLRQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXX 563
DFE P + D GI +L Q FL++++DL +++ II++ G V+ Q
Sbjct: 71 DFEAYPPSEDDRDGIVNMLTQTFLRTDIDLKAMSEGIIAKAPHGVVLTQA------YDDE 124
Query: 562 XXXXXXGVFGVTTVVNITKRKNEPSVAQIRELLTKL---SQENADPRTKELIKYILADDS 392
+G+ T V + K++ + I++L T + +++ A + I+ I
Sbjct: 125 ETEEDYMAYGLCTTVPLNDNKDD-APKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGD 183
Query: 391 QHTGLVINERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISK 242
+ L +NER+LN P + +F S++ +L K +K +I+I K
Sbjct: 184 GKSALFVNERLLNFPTIVVPQIFGSIREDLSGFETK-----YKTIIYIQK 228
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 232 TGESSEVLFANQEEKSLVSEAIASFDVDV 146
T E+LFAN EE S+VS+A A+ VDV
Sbjct: 1068 TATQEELLFANSEENSMVSDANANPTVDV 1096
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 232 TGESSEVLFANQEEKSLVSEAIASFDVDV 146
T E+LFAN EE S+VS+A A+ VDV
Sbjct: 1068 TATQEELLFANSEENSMVSDANANPTVDV 1096
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 232 TGESSEVLFANQEEKSLVSEAIASFDVDV 146
T E+LFAN EE S+VS+A A+ VDV
Sbjct: 1068 TATQEELLFANSEENSMVSDANANPTVDV 1096
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 232 TGESSEVLFANQEEKSLVSEAIASFDVDV 146
T E+LFAN EE S+VS+A A+ VDV
Sbjct: 1068 TATQEELLFANSEENSMVSDANANPTVDV 1096
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 232 TGESSEVLFANQEEKSLVSEAIASFDVDV 146
T E+LFAN EE S+VS+A A+ VDV
Sbjct: 1072 TATQEELLFANSEENSMVSDANANPTVDV 1100
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 373 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSEVLFANQE 194
INER L + V +F +L+ ++ L FK +IW+ K Y +++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 193 EKS 185
+K+
Sbjct: 185 QKN 187
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 373 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSEVLFANQE 194
INER L + V +F +L+ ++ L FK +IW+ K Y +++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 193 EKS 185
+K+
Sbjct: 185 QKN 187
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 208 FANQEEKSLVSEAIASFDVDVTDQADLSQWDYEG 107
+ QE +V IA D D D S+WD+EG
Sbjct: 175 YTTQEVTCIVGRDIAPNDTDFGDFHGNSEWDFEG 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,260,821
Number of Sequences: 27780
Number of extensions: 248222
Number of successful extensions: 683
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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