Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N05
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006651-9|AAF39867.1| 323|Caenorhabditis elegans Surfeit homol... 199 2e-51
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 5.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.8
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.8
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 28 9.0
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 28 9.0
AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical ... 28 9.0
>AC006651-9|AAF39867.1| 323|Caenorhabditis elegans Surfeit homolog
protein 1 protein.
Length = 323
Score = 199 bits (486), Expect = 2e-51
Identities = 99/232 (42%), Positives = 145/232 (62%), Gaps = 4/232 (1%)
Frame = -1
Query: 791 ILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFS--ELEKMEYLPVKV 618
++L IPV +F+LG WQ +R +WKL LI+ ++ + N ++P+D S LE +EY V V
Sbjct: 87 LMLTIPVFAFSLGIWQTFRLKWKLDLIEHLKGRLNQTAQELPEDLSCESLEPLEYCRVTV 146
Query: 617 KGEFLHEKEILIGPRALIEESSITNRV-GSLVSDPK-KNQGWLVITPFKLADTGEVILIN 444
GEFLHEKE +I PR + T+ GS++S+ + + G +ITPF+L ++G++ILIN
Sbjct: 147 TGEFLHEKEFIISPRGRFDPGKKTSAAAGSMLSENEMSSHGGHLITPFRLKNSGKIILIN 206
Query: 443 RGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPKNNPEKGSWFYRDLDQMSAH 264
RGW+ E R+ + +G + L +VR TEKR F+ +N PE+G W+YRDL+QM+ H
Sbjct: 207 RGWLPSFYFDPETRQKTNPRGTLTLPAIVRKTEKRPQFVGQNVPEQGVWYYRDLNQMAKH 266
Query: 263 IGCLPIWLDAKGIPDPPTGWPIPNQTRVTLRNEHFSYIVTWYXLFAXTRXMW 108
G P+ LDA P G PI QT + +RNEH +Y+ TW+ L T MW
Sbjct: 267 YGTEPVLLDAAYETTVP-GGPIGGQTNINVRNEHLNYLTTWFTLTLVTMLMW 317
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 31.5 bits (68), Expect = 0.73
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 147 DNVRKVFIPQCYSGLIWNRPTSRWVWDTFCIQP 245
D + P Y G IWN T W +D + P
Sbjct: 392 DGTENAYDPNAYPGYIWNYETQEWEYDPSYVAP 424
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -1
Query: 635 YLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTGEV 456
Y+P+ + F +E + +++++ ++ N V SL+ D KN+ V +KL +
Sbjct: 487 YIPI-AQQFFQRFREFAVAGFSMLDKETVRNYVESLLRDMMKNKLDRVRRVYKLTHGEDS 545
Query: 455 ILINRGWIHQNL 420
I + W+ + L
Sbjct: 546 IRVKTRWMKEEL 557
>Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical
protein R07E3.5a protein.
Length = 512
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = -1
Query: 791 ILLMIPVTSFTLGSWQ------VYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEKMEYL 630
+L+ + VT TLG + VY ++W L + + + +V DMP+DF +
Sbjct: 12 LLIFLAVTGKTLGLREYYVNTLVYIFEWGATLNEQYEEEEGSVEEDMPEDFQHKKPRRSS 71
Query: 629 PVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVS 522
G EK +I A + E+++ + VS
Sbjct: 72 SASDLGIINREKSDIID--AKLHETNVPEAKQTTVS 105
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 356 RLTEKRAPFMPKNNPEKGSWFYRDLDQMSAHIGCLPIW 243
RL K AP P+++P+K +F +D H + +W
Sbjct: 264 RLVRKIAPLEPEDDPDKFEYFIATVDCSPRHPIMIQLW 301
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 3125
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 2429 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 2485
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 3125
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 3125
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 2429 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 2485
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHE 753
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE 3125
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 164 VHSAMLLWFDLESANQ*VGLGYLLHPTKSANI 259
VHS + L DL++ Q + GY HP+ N+
Sbjct: 242 VHSVLCLNLDLQAIYQCIRQGYETHPSAPGNV 273
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 164 VHSAMLLWFDLESANQ*VGLGYLLHPTKSANI 259
VHS + L DL++ Q + GY HP+ N+
Sbjct: 63 VHSVLCLNLDLQAIYQCIRQGYETHPSAPGNV 94
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 164 VHSAMLLWFDLESANQ*VGLGYLLHPTKSANI 259
VHS + L DL++ Q + GY HP+ N+
Sbjct: 242 VHSVLCLNLDLQAIYQCIRQGYETHPSAPGNV 273
>AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical
protein ZK121.2 protein.
Length = 558
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Frame = +1
Query: 592 SFSCKNSPFTFTGKYSIFSNSEKSFGMSIG-------TALDLACIMSMSPSFHCHLYTCH 750
SF C N+ + TGK+ + +E GM+ G ++ + C S H H + H
Sbjct: 344 SFDCSNNSYLCTGKHPMMRKAESFGGMANGISHGCYEQSVPVVCGTPPSVMVHHHHHHAH 403
Query: 751 --EPRVKEVTG 777
+P TG
Sbjct: 404 IQQPPTSNYTG 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,071,389
Number of Sequences: 27780
Number of extensions: 365784
Number of successful extensions: 991
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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