Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_N02
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U80840-4|AAB37931.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p... 28 4.5
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein. 28 4.5
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ... 28 4.5
Z92812-2|CAB07277.1| 213|Caenorhabditis elegans Hypothetical pr... 27 7.9
U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Frame = -3
Query: 606 LXGSGPNRTQRHRKAITVHFAS-SACEYVDVRGSVQERLAADVQAAA----TRRGLQ--- 451
+ GSG NRT+ RKAI+ H+A+ C YV+V G+ QE LA ++ A TR GL
Sbjct: 230 IHGSGANRTEGFRKAISCHYANDDLCRYVNVEGTTQETLAEEIIEIAKKRLTRYGLDPNT 289
Query: 450 --VSYQDIWRYKSKQVKGVRSNL 388
+ + DIWR ++++V G RSNL
Sbjct: 290 VTLDFADIWRVRAREVNGRRSNL 312
>Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Frame = -3
Query: 606 LXGSGPNRTQRHRKAITVHFAS-SACEYVDVRGSVQERLAADVQAAA----TRRGLQ--- 451
+ GSG NRT+ RKAI+ H+A+ C YV+V G+ QE LA ++ A TR GL
Sbjct: 230 IHGSGANRTEGFRKAISCHYANDDLCRYVNVEGTTQETLAEEIIEIAKKRLTRYGLDPNT 289
Query: 450 --VSYQDIWRYKSKQVKGVRSNL 388
+ + DIWR ++++V G RSNL
Sbjct: 290 VTLDFADIWRVRAREVNGRRSNL 312
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -3
Query: 600 GSGPNRTQRHRKAITVHFAS-SACEYVDVRGSVQERLAADVQ--------AAATRRGLQV 448
GSG NR++ RKAI+ H+A+ +Y+DV+G+ QE ++ A + G +V
Sbjct: 248 GSGANRSEGFRKAISCHYANYDHTKYIDVKGTAQEEAGKQIEDIIRKHPKRYAVKPGQEV 307
Query: 447 SYQDIWRYKSKQV 409
+++ WR +S+ V
Sbjct: 308 TFELTWRLRSRPV 320
>U80840-4|AAB37931.1| 340|Caenorhabditis elegans Hypothetical
protein F08D12.9 protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 495 LAADVQAAATRRGLQVSYQDIWRYKSKQVKGVRSNL 388
LA Q + GL+V D W Y V +RSNL
Sbjct: 141 LANSRQISKVLNGLKVKNMDFWNYTEDGVFNIRSNL 176
>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 558 TVHFASSACEYVDVRGSVQERLAADVQAAATRRGLQVSYQDIWRYKSKQVKGVRSNL*AI 379
T H+A +Y+ V S + L + V+AA ++SYQ WR + ++ GV + I
Sbjct: 192 TSHYAFPEEQYLCVGESCPKDLESKVKAA------KLSYQMFWRKRKAEINGVCEKMMKI 245
Query: 378 HYE 370
E
Sbjct: 246 QIE 248
>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
Length = 1167
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 558 TVHFASSACEYVDVRGSVQERLAADVQAAATRRGLQVSYQDIWRYKSKQVKGVRSNL*AI 379
T H+A +Y+ V S + L + V+AA ++SYQ WR + ++ GV + I
Sbjct: 213 TSHYAFPEEQYLCVGESCPKDLESKVKAA------KLSYQMFWRKRKAEINGVCEKMMKI 266
Query: 378 HYE 370
E
Sbjct: 267 QIE 269
>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 558 TVHFASSACEYVDVRGSVQERLAADVQAAATRRGLQVSYQDIWRYKSKQVKGVRSNL*AI 379
T H+A +Y+ V S + L + V+AA ++SYQ WR + ++ GV + I
Sbjct: 192 TSHYAFPEEQYLCVGESCPKDLESKVKAA------KLSYQMFWRKRKAEINGVCEKMMKI 245
Query: 378 HYE 370
E
Sbjct: 246 QIE 248
>Z92812-2|CAB07277.1| 213|Caenorhabditis elegans Hypothetical
protein T03E6.2 protein.
Length = 213
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +3
Query: 231 FVACNAVDDLAVYLML-RAHKIFG 299
F++ ++ L +YL+L RAHKIFG
Sbjct: 10 FISSQVINCLLLYLLLARAHKIFG 33
>U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical
protein F19C7.3 protein.
Length = 310
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 310 WSFNTTS*SKIISVSYKNINFIMYCLQIRSHTLDLFTFVSPDVLI 444
W +NTT I S N N CL + + DLF+ D++I
Sbjct: 69 WFYNTTKLDNIHKKSIFNFNNSKKCLTLLTRFDDLFSIDHVDLII 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,008,980
Number of Sequences: 27780
Number of extensions: 215863
Number of successful extensions: 543
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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