Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_M24
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 36 0.023
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.095
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 34 0.13
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 34 0.13
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 32 0.38
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.67
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 31 0.67
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 31 0.67
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 29 2.7
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 29 2.7
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 29 2.7
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 29 2.7
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 28 8.2
AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine re... 28 8.2
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -1
Query: 493 GINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTE-HKQAIQDVAYSTEKVSLWKA 317
G + + + K +G WDG IR+FS + L+ LT H I + + + +
Sbjct: 238 GCSAISFSPNSKQIIAGFWDGSIRVFSRHRLNVLLALTNAHSSTISSIIWLPPE----QG 293
Query: 316 YIMAAGGLDGAITLWDL 266
I+ A D ++LW L
Sbjct: 294 EIVIATSSDSTVSLWKL 310
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Frame = -1
Query: 469 SDGKVFTSGGWDGHIRIFSW--------FSMRPLVVLTEHKQAIQDVAYSTEKVSL 326
S GK+F +GG DGHIRI++ +P++ + HK + D+ +S + ++
Sbjct: 154 SRGKIFATGGADGHIRIWNAQIVFRAENEDAQPILTIQAHKADVDDIDFSKDSKTI 209
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/156 (20%), Positives = 63/156 (40%)
Frame = -1
Query: 727 DRPCLLAGYEAGWLLLWDLNTNKCISKLQVLECPMSVDYHLEQQRGIIGNASNVIQIFNL 548
D +++G + +WD+ T +CI L + C + HL GI+ S I
Sbjct: 271 DNRVIISGSSDATVRVWDVETGECIKTL-IHHCEAVL--HLRFANGIMVTCSKDRSIAVW 327
Query: 547 GRXXXXXXXXXDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQ 368
V + + V D + ++ G D I+++S ++ + L H++
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG-DRTIKVWSMDTLEFVRTLAGHRR 386
Query: 367 AIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYN 260
I + Y + ++ +G D I LWD+++
Sbjct: 387 GIACLQY--------RGRLVVSGSSDNTIRLWDIHS 414
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/156 (20%), Positives = 63/156 (40%)
Frame = -1
Query: 727 DRPCLLAGYEAGWLLLWDLNTNKCISKLQVLECPMSVDYHLEQQRGIIGNASNVIQIFNL 548
D +++G + +WD+ T +CI L + C + HL GI+ S I
Sbjct: 271 DNRVIISGSSDATVRVWDVETGECIKTL-IHHCEAVL--HLRFANGIMVTCSKDRSIAVW 327
Query: 547 GRXXXXXXXXXDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQ 368
V + + V D + ++ G D I+++S ++ + L H++
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG-DRTIKVWSMDTLEFVRTLAGHRR 386
Query: 367 AIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYN 260
I + Y + ++ +G D I LWD+++
Sbjct: 387 GIACLQY--------RGRLVVSGSSDNTIRLWDIHS 414
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -1
Query: 469 SDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLD 290
SDGK+ + DG +RIF++ + L V+ + + +++S + A ++A GG D
Sbjct: 315 SDGKMMATVSHDGFLRIFNYHAQELLAVMKSYFGGLLTLSWSPD------AKLIATGGED 368
Query: 289 GAITLWDL 266
+T++ +
Sbjct: 369 DLLTVYSV 376
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 32.7 bits (71), Expect = 0.29
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
Frame = -1
Query: 730 CDRPCLLA-GYEAGWLLLWDLNTNKCISKLQVLECPMSVDYHLEQQRGIIGNASNVIQIF 554
CD+ LLA G G +WD+ T K K + L S L I + S I
Sbjct: 447 CDKGDLLAVGTSRGVTQIWDVTTQK---KTRELTGHSSRVGCLAWNADTICSGSRDRTIM 503
Query: 553 NLGRXXXXXXXXXDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEH 374
+ +T + +K D ++ SGG D + +++ P+ T+H
Sbjct: 504 HRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQH 563
Query: 373 KQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 269
A++ +A+S L + G D + W+
Sbjct: 564 NAAVKALAWSPHHHGL---LVSGGGTADRCLRFWN 595
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.29
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -1
Query: 682 LWDLNTNKCISKLQVLECPMS-VDYHLEQQRGIIGNASNVIQIFNLGRXXXXXXXXXDVT 506
+WD+ T CI L P+S V ++ + G+ +++I++ V
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN---GQCIKTLVD 253
Query: 505 IKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSL 326
+NP + VK +GK + D ++++ + + L T H+ + + ++ V+
Sbjct: 254 DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENS-KYCIFANFSVTG 312
Query: 325 WKAYIMAAGGLDGAITLWDL 266
K I +G D I +W+L
Sbjct: 313 GKWII--SGSEDCKIYIWNL 330
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = -1
Query: 490 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYI 311
++ V DG + SG +DG +RI+ + + + L + + VA+ K S YI
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN--PPVAF--VKFSPNGKYI 271
Query: 310 MAAGGLDGAITLWDLYNSK 254
+A+ LD + LWD K
Sbjct: 272 LAS-NLDSTLKLWDFSKGK 289
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -1
Query: 457 VFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAIT 278
VF S G D + ++ +P + H + + ++ + YI+A G +D +
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNP-----FSEYILATGSVDKTVA 290
Query: 277 LWDLYNSKQ 251
LWD+ N ++
Sbjct: 291 LWDMRNMRK 299
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 490 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM-RPLVVLTEHKQAIQDVAYSTEKVSLWKAY 314
I+ V+ + + G DG +++F+ + ++ + HK+A+ + +S++ +
Sbjct: 63 ISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGL------ 116
Query: 313 IMAAGGLDGAITLWDL 266
+ A GG DG I LWD+
Sbjct: 117 LFATGGKDGVIVLWDI 132
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -1
Query: 490 INKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAY 347
+N ++ SDG +F +GG DG I ++ + R + L HK+++ + +
Sbjct: 106 VNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFRLHGHKESVTQMKF 153
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 31.9 bits (69), Expect = 0.51
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Frame = -1
Query: 688 LLLWDLNTNKCISK-LQVLECPMSVDYHLEQQRGIIGNASNVIQIFNLGRXXXXXXXXXD 512
L LWDLN + + + +SV + + ++ + G+ I+++N
Sbjct: 93 LRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDC 152
Query: 511 VTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKV 332
T + + D V S GWD +++++ + R H + V S +
Sbjct: 153 HTDWVSTVRFSPSNRD-PVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPD-- 209
Query: 331 SLWKAYIMAAGGLDGAITLWDLYNSK 254
+ A+GG DG LWDL K
Sbjct: 210 ----GSLCASGGKDGQAMLWDLNEGK 231
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -1
Query: 511 VTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKV 332
+T N ++ V SDG+ SG WD +R++ H + + VA+S +
Sbjct: 65 LTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 331 SLWKAYIMAAGGLDGAITLWD 269
+ +G D +I LW+
Sbjct: 125 QI------VSGSRDKSIKLWN 139
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.67
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
Frame = -1
Query: 742 IEFPCDRPCLLAGYEAGWLLLWDLNTNKCISKLQVLECPM-SVDYHLEQQRGIIGNASNV 566
+ F D L G + +WD+ T +CI L + SV++ I G++ N
Sbjct: 344 VAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNS 403
Query: 565 IQIFNLGRXXXXXXXXXDVTIKNPGINKVKTRSDGKVFTSGGWDGHIRIFSWFSMRPLVV 386
+++++L ++ + +V+ + G+ S +D ++++S +PL
Sbjct: 404 MKVWDLRMRRNTYTMPAHTSV----VTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQ 459
Query: 385 LTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLW 272
L H I V S + W M + D LW
Sbjct: 460 LQGHDTRILCVDISPD--GQW----MCSSAFDRTFKLW 491
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 466 DGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDG 287
DG V +GG D + R++ + R ++ L H + I V + + Y M G D
Sbjct: 349 DGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEW------MPNGYEMITGSSDN 402
Query: 286 AITLWDL 266
++ +WDL
Sbjct: 403 SMKVWDL 409
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 742 IEFPCDRPCLLAGYEAGWLLLWDLNTNKCISKLQVLE--CPMSVDYHLEQQRGIIGNASN 569
I+F D+ L++G G L +WD T+K + K + + C ++ + E+ R I
Sbjct: 502 IDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITAGWDG 561
Query: 568 VIQIFN 551
+I+++N
Sbjct: 562 LIKMWN 567
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -1
Query: 385 LTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWD 269
LT HK++++D+A+S + L +A+ DG+I LWD
Sbjct: 271 LTGHKKSVEDLAWSPTETGL-----LASCSADGSIKLWD 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -1
Query: 490 INKVKTRSDGKVFTSGGWDGHIRIFSWFSM---RPLVVLTEHKQAIQDVAYSTEKVSLWK 320
+N + + SGG DG ++I+S ++ +P+ + H I V + + + +
Sbjct: 325 VNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTF- 383
Query: 319 AYIMAAGGLDGAITLWDL 266
A G D T+WD+
Sbjct: 384 ----MASGEDDQTTIWDI 397
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 436 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 257
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQR 490
Query: 256 KQ 251
K+
Sbjct: 491 KE 492
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 436 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 257
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQR 490
Query: 256 KQ 251
K+
Sbjct: 491 KE 492
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 436 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 257
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQR 490
Query: 256 KQ 251
K+
Sbjct: 491 KE 492
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 436 DGHIRIFSWFSMRPLVVLTEHKQAIQDVAYSTEKVSLWKAYIMAAGGLDGAITLWDLYNS 257
DG+I I+ + + L H+ + S + LW +GGLD ++ WDL
Sbjct: 437 DGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLW------SGGLDNSVRCWDLAQR 490
Query: 256 KQ 251
K+
Sbjct: 491 KE 492
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 307 AAGGLDGAITLWDLYNSKQ 251
A GG DG + +WD +N K+
Sbjct: 267 ATGGADGIVNIWDPFNRKR 285
>AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine
receptor, class i protein60 protein.
Length = 334
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 751 LKFIEFPCDRPCLLAGYEAGWLLLWDLNTNKCISKLQVLE 632
L F+ P + +LAGY G+L + + T+ C++ L + E
Sbjct: 62 LTFLMQPVELYPILAGYSMGFLAQFGVTTHFCLTMLMLSE 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,046,100
Number of Sequences: 27780
Number of extensions: 307117
Number of successful extensions: 713
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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