Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M22
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.        31   5.4  
BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.        31   5.4  
BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin fami...    31   5.4  
BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C...    31   5.4  
AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor...    31   5.4  
AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KI...    31   5.4  

>BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 235 ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 294

Query: 531 RPPN 542
           +  N
Sbjct: 295 KCHN 298


>BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.
          Length = 687

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 235 ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 294

Query: 531 RPPN 542
           +  N
Sbjct: 295 KCHN 298


>BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin family
           member C3 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 94  ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 153

Query: 531 RPPN 542
           +  N
Sbjct: 154 KCHN 157


>BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C3
           protein.
          Length = 833

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 374 ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 433

Query: 531 RPPN 542
           +  N
Sbjct: 434 KCHN 437


>AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor
           protein.
          Length = 687

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 235 ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 294

Query: 531 RPPN 542
           +  N
Sbjct: 295 KCHN 298


>AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KIFC3
           variant protein.
          Length = 870

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +3

Query: 351 ASHTLRYKF*GLKYSYNGCPTLQTETHYCFTAEIGRVVVHTRADSQEVHHQ*ERRLNVSS 530
           A  TL   + GLK    G P L  E      AEIG+ +    +++QE+  +  R L +  
Sbjct: 418 ALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRK 477

Query: 531 RPPN 542
           +  N
Sbjct: 478 KCHN 481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,019,165
Number of Sequences: 237096
Number of extensions: 2629201
Number of successful extensions: 8207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8207
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)