Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M22
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80451-2|AAB37837.1|  223|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical...    29   5.7  

>U80451-2|AAB37837.1|  223|Caenorhabditis elegans Hypothetical
           protein F11G11.5 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 404 LPHPSNRNALLLHGRNRQGSGTYPCGLTRGSPPVRKKT*RIIQT--PQPPAAKNIV 565
           +P PS + A+        G  T P     G PP+  +  +I QT  PQP A + IV
Sbjct: 92  MPPPSYQAAMSYPAAPTYGGSTDPKYHNGGQPPIYYQPPQITQTRLPQPAAIEQIV 147


>AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical
           protein Y54G2A.40 protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 611 LLERTGRCLNRLFRLKYICLLYF 679
           + ER+G+CL R  RLK  CL  F
Sbjct: 200 IAERSGKCLLRTMRLKRACLKLF 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,319,726
Number of Sequences: 27780
Number of extensions: 410814
Number of successful extensions: 827
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)