Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_M21
(379 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036689-1|AAH36689.1| 323|Homo sapiens MAFB protein protein. 32 0.54
BC028098-1|AAH28098.1| 323|Homo sapiens v-maf musculoaponeuroti... 32 0.54
AL035665-1|CAB75863.1| 323|Homo sapiens v-maf musculoaponeuroti... 32 0.54
AF134157-1|AAD30106.1| 323|Homo sapiens MAFB/Kreisler basic reg... 32 0.54
U51096-1|AAB40603.1| 311|Homo sapiens homeobox protein Cdx2 pro... 31 0.94
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 31 0.94
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein. 31 0.94
AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein. 31 1.2
AB208783-1|BAD92020.1| 742|Homo sapiens Oviduct-specific glycop... 31 1.2
AY669507-1|AAV74188.1| 868|Homo sapiens functional smad suppres... 31 1.6
Y13709-1|CAA74038.1| 313|Homo sapiens caudal-type homeobox prot... 30 2.9
BC014461-1|AAH14461.1| 313|Homo sapiens caudal type homeobox tr... 30 2.9
AL591024-2|CAH70633.1| 313|Homo sapiens caudal type homeobox tr... 30 2.9
AJ278431-1|CAB94779.1| 313|Homo sapiens caudal type homeobox tr... 30 2.9
AF007886-1|AAD05200.1| 313|Homo sapiens caudal-type homeobox pr... 30 2.9
X78202-1|CAA55038.1| 469|Homo sapiens HBF-G2 (HFK-2) protein. 29 3.8
X74143-1|CAA52240.1| 469|Homo sapiens transcription factor prot... 29 3.8
BC139728-1|AAI39729.1| 250|Homo sapiens C10orf27 protein protein. 29 3.8
AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance calci... 29 3.8
AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance calci... 29 3.8
AL954342-3|CAH72739.1| 731|Homo sapiens potassium intermediate/... 29 3.8
AL606500-5|CAH71911.1| 731|Homo sapiens potassium intermediate/... 29 3.8
AL390204-3|CAH71151.1| 731|Homo sapiens potassium intermediate/... 29 3.8
AL358817-2|CAI13855.1| 351|Homo sapiens chromosome 10 open read... 29 3.8
AK057382-1|BAB71459.1| 351|Homo sapiens protein ( Homo sapiens ... 29 3.8
AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein. 29 3.8
AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance calci... 29 3.8
AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated potas... 29 3.8
AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens ... 29 5.0
DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein. 29 6.6
BC130531-1|AAI30532.1| 491|Homo sapiens Cas-Br-M (murine) ecotr... 29 6.6
BC130529-1|AAI30530.1| 491|Homo sapiens Cas-Br-M (murine) ecotr... 29 6.6
BC028165-1|AAH28165.1| 1159|Homo sapiens protocadherin 17 protein. 29 6.6
BC027460-1|AAH27460.2| 488|Homo sapiens CBLL1 protein protein. 29 6.6
AL445288-1|CAI17092.1| 1159|Homo sapiens protocadherin 17 protein. 29 6.6
AL445216-1|CAH71250.1| 1159|Homo sapiens protocadherin 17 protein. 29 6.6
AK026762-1|BAB15544.1| 491|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF029343-1|AAB84144.1| 889|Homo sapiens protocadherin 68 protein. 29 6.6
AC002467-2|AAS07390.1| 491|Homo sapiens unknown protein. 29 6.6
Y12661-1|CAA73210.1| 616|Homo sapiens neuro-endocrine specific ... 28 8.8
BC053326-1|AAH53326.1| 497|Homo sapiens family with sequence si... 28 8.8
BC036076-1|AAH36076.1| 350|Homo sapiens KLHDC8A protein protein. 28 8.8
AK025808-1|BAB15241.1| 497|Homo sapiens protein ( Homo sapiens ... 28 8.8
AK001610-1|BAA91787.1| 350|Homo sapiens protein ( Homo sapiens ... 28 8.8
>BC036689-1|AAH36689.1| 323|Homo sapiens MAFB protein protein.
Length = 323
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGG 54
HH A+ P A SP + S P P P +TA A GG
Sbjct: 165 HHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGG 203
>BC028098-1|AAH28098.1| 323|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog B (avian) protein.
Length = 323
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGG 54
HH A+ P A SP + S P P P +TA A GG
Sbjct: 165 HHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGG 203
>AL035665-1|CAB75863.1| 323|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog B (avian) protein.
Length = 323
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGG 54
HH A+ P A SP + S P P P +TA A GG
Sbjct: 165 HHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGG 203
>AF134157-1|AAD30106.1| 323|Homo sapiens MAFB/Kreisler basic
region/leucine zipper transcription factor protein.
Length = 323
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGG 54
HH A+ P A SP + S P P P +TA A GG
Sbjct: 165 HHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGG 203
>U51096-1|AAB40603.1| 311|Homo sapiens homeobox protein Cdx2
protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.94
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Frame = -3
Query: 281 RASHNGYNNG*PRDRGRTQTEIEGCSPLPV-----PFDRQSVHHANATHPHQDAGSPPCA 117
R NGY G + G SP P D HH + HPH A +P CA
Sbjct: 73 REDWNGYAPGGAAAANAVAHALNGGSPAAAMGYSSPADYHPHHHPHH-HPHHPAAAPSCA 131
Query: 116 ------VTKSLPLPAPSSTAREIARGG 54
+ P PA ++ A +++ GG
Sbjct: 132 SGLLQTLNPGPPGPAATAAAEQLSPGG 158
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 154 HIPTKMRDPLHVPSQNHSRSRLLPPPP 74
++P+ P PSQ HS+S+LL PPP
Sbjct: 52 YLPSSQASPSR-PSQGHSKSQLLAPPP 77
>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
Length = 1822
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 154 HIPTKMRDPLHVPSQNHSRSRLLPPPP 74
++P+ P PSQ HS+S+LL PPP
Sbjct: 224 YLPSSQASPSR-PSQGHSKSQLLAPPP 249
>AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein.
Length = 1207
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 130 PLHVPSQNHSRSRLLPPPPGKSREE 56
PL P + S SRL PPPP + E+
Sbjct: 90 PLEEPVEGRSESRLRPPPPSEGEED 114
>AB208783-1|BAD92020.1| 742|Homo sapiens Oviduct-specific
glycoprotein precursor variant protein.
Length = 742
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -1
Query: 256 MGSRVIVGGPRQKSKVVHPYQFLLTDRASITRTRHIPTKMRDPLHVPSQNHSRSRLL 86
M + IV Q K+++P L +R + +PT +++P H PS +H R+R L
Sbjct: 103 MNNNQIVAKDLQDEKILYPEFNKLKERM----WQQLPTGVKNPAHQPSLSHHRNREL 155
>AY669507-1|AAV74188.1| 868|Homo sapiens functional smad
suppressing element 15 protein.
Length = 868
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 115 SQNHSRSRLLPPPPGKSREEGLTRPSRHSIAVYRWPR 5
S++ RS LLPPP S + G PS HS + PR
Sbjct: 78 SKDRLRSSLLPPPGPPSSDSGPGPPSSHSGKTAQGPR 114
>Y13709-1|CAA74038.1| 313|Homo sapiens caudal-type homeobox protein
2 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCA------VTKSLPLPAPSSTAREIARGG 54
HH HPH A +P CA + P PA ++ A +++ GG
Sbjct: 116 HHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGG 160
>BC014461-1|AAH14461.1| 313|Homo sapiens caudal type homeobox
transcription factor 2 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCA------VTKSLPLPAPSSTAREIARGG 54
HH HPH A +P CA + P PA ++ A +++ GG
Sbjct: 116 HHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGG 160
>AL591024-2|CAH70633.1| 313|Homo sapiens caudal type homeobox
transcription factor 2 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCA------VTKSLPLPAPSSTAREIARGG 54
HH HPH A +P CA + P PA ++ A +++ GG
Sbjct: 116 HHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGG 160
>AJ278431-1|CAB94779.1| 313|Homo sapiens caudal type homeobox
transcription factor protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCA------VTKSLPLPAPSSTAREIARGG 54
HH HPH A +P CA + P PA ++ A +++ GG
Sbjct: 116 HHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGG 160
>AF007886-1|AAD05200.1| 313|Homo sapiens caudal-type homeobox
protein 2/3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCA------VTKSLPLPAPSSTAREIARGG 54
HH HPH A +P CA + P PA ++ A +++ GG
Sbjct: 116 HHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGG 160
>X78202-1|CAA55038.1| 469|Homo sapiens HBF-G2 (HFK-2) protein.
Length = 469
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALTALN-RGLPVATR 3
HH + HP A PP + P P P AR R G + +A + G P R
Sbjct: 51 HHHHHHHPPPPAPQPPPPPQQQQPPPPPRRGARRRRRRGPSSCCSAAHAHGAPEGQR 107
>X74143-1|CAA52240.1| 469|Homo sapiens transcription factor
protein.
Length = 469
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALTALN-RGLPVATR 3
HH + HP A PP + P P P AR R G + +A + G P R
Sbjct: 51 HHHHHHHPPPPAPQPPPPPQQQQPPPPPRRGARRRRRRGPSSCCSAAHAHGAPEGQR 107
>BC139728-1|AAI39729.1| 250|Homo sapiens C10orf27 protein protein.
Length = 250
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 188 FDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSST 78
F R H + TH G P C V + P P P ST
Sbjct: 78 FSRHHPHPQHVTHIQDLTGKPVC-VVRDFPAPLPEST 113
>AY258142-1|AAP45947.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 240 LHHPNATHNHQHAGTTASSTT 260
>AY049734-1|AAL10706.1| 737|Homo sapiens small-conductance
calcium-activated potassium channel SK3 protein.
Length = 737
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 240 LHHPNATHNHQHAGTTASSTT 260
>AL954342-3|CAH72739.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 234 LHHPNATHNHQHAGTTASSTT 254
>AL606500-5|CAH71911.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 234 LHHPNATHNHQHAGTTASSTT 254
>AL390204-3|CAH71151.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 234 LHHPNATHNHQHAGTTASSTT 254
>AL358817-2|CAI13855.1| 351|Homo sapiens chromosome 10 open reading
frame 27 protein.
Length = 351
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 188 FDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSST 78
F R H + TH G P C V + P P P ST
Sbjct: 78 FSRHHPHPQHVTHIQDLTGKPVC-VVRDFPAPLPEST 113
>AK057382-1|BAB71459.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ32820 fis, clone TESTI2002965. ).
Length = 351
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 188 FDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSST 78
F R H + TH G P C V + P P P ST
Sbjct: 78 FSRHHPHPQHVTHIQDLTGKPVC-VVRDFPAPLPEST 113
>AJ251016-1|CAB61331.1| 736|Homo sapiens SK3 protein protein.
Length = 736
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 239 LHHPNATHNHQHAGTTASSTT 259
>AF336797-1|AAK15345.1| 736|Homo sapiens small-conductance
calcium-activated potassium channel protein.
Length = 736
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 239 LHHPNATHNHQHAGTTASSTT 259
>AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated
potassium channel protein.
Length = 731
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 173 VHHANATHPHQDAGSPPCAVT 111
+HH NATH HQ AG+ + T
Sbjct: 234 LHHPNATHNHQHAGTAASSTT 254
>AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ16779 fis, clone BRHIP3038037. ).
Length = 205
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 203 PLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARG 57
P P R A PH +PP AV P PS AR+ A G
Sbjct: 21 PAAAPRARTPGTGPGAATPHAPQATPPSAVAARGPRHPPSELARDPANG 69
>DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein.
Length = 868
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 170 HHANATHPHQDAGSPPCAVTKSLPLPAPSS 81
HHA+ HP A +PP P P+ S+
Sbjct: 151 HHAHHAHPRASASAPPLPQAPQPPAPSRSA 180
>BC130531-1|AAI30532.1| 491|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence-like 1
protein.
Length = 491
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 179 QSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIAR 60
Q V H + PH+D +PP + S+ P P S ++E R
Sbjct: 246 QHVPHEHYNQPHEDIRAPPAEL--SMAPPPPRSVSQETFR 283
>BC130529-1|AAI30530.1| 491|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence-like 1
protein.
Length = 491
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 179 QSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIAR 60
Q V H + PH+D +PP + S+ P P S ++E R
Sbjct: 246 QHVPHEHYNQPHEDIRAPPAEL--SMAPPPPRSVSQETFR 283
>BC028165-1|AAH28165.1| 1159|Homo sapiens protocadherin 17 protein.
Length = 1159
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 191 PFDRQSVHHANATHPHQDAGSPPCAVTKSLPL 96
P DR++ N T +D GSPP TKS +
Sbjct: 429 PLDRETQDEYNVTIVARDGGSPPLNSTKSFAI 460
>BC027460-1|AAH27460.2| 488|Homo sapiens CBLL1 protein protein.
Length = 488
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 179 QSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIAR 60
Q V H + PH+D +PP + S+ P P S ++E R
Sbjct: 243 QHVPHEHYNQPHEDIRAPPAEL--SMAPPPPRSVSQETFR 280
>AL445288-1|CAI17092.1| 1159|Homo sapiens protocadherin 17 protein.
Length = 1159
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 191 PFDRQSVHHANATHPHQDAGSPPCAVTKSLPL 96
P DR++ N T +D GSPP TKS +
Sbjct: 429 PLDRETQDEYNVTIVARDGGSPPLNSTKSFAI 460
>AL445216-1|CAH71250.1| 1159|Homo sapiens protocadherin 17 protein.
Length = 1159
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 191 PFDRQSVHHANATHPHQDAGSPPCAVTKSLPL 96
P DR++ N T +D GSPP TKS +
Sbjct: 429 PLDRETQDEYNVTIVARDGGSPPLNSTKSFAI 460
>AK026762-1|BAB15544.1| 491|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23109 fis, clone LNG07754. ).
Length = 491
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 179 QSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIAR 60
Q V H + PH+D +PP + S+ P P S ++E R
Sbjct: 246 QHVPHEHYNQPHEDIRAPPAEL--SMAPPPPRSVSQETFR 283
>AF029343-1|AAB84144.1| 889|Homo sapiens protocadherin 68 protein.
Length = 889
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 191 PFDRQSVHHANATHPHQDAGSPPCAVTKSLPL 96
P DR++ N T +D GSPP TKS +
Sbjct: 429 PMDRETQDEYNVTIVARDGGSPPLNSTKSFAI 460
>AC002467-2|AAS07390.1| 491|Homo sapiens unknown protein.
Length = 491
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 179 QSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIAR 60
Q V H + PH+D +PP + S+ P P S ++E R
Sbjct: 246 QHVPHEHYNQPHEDIRAPPAEL--SMAPPPPRSVSQETFR 283
>Y12661-1|CAA73210.1| 616|Homo sapiens neuro-endocrine specific
protein VGF protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 148 PTKMRDPLHVPSQNHSRSRLLPPPPGKSREE 56
P + P P+ H RS PPPP +R+E
Sbjct: 489 PEPVPPPRAAPAPTHVRSPQPPPPPPSARDE 519
>BC053326-1|AAH53326.1| 497|Homo sapiens family with sequence
similarity 134, member B protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 73 LAVEEGAGSGSDFVTAHGGDPASWWGCVA 159
L VEE AG + VT G+P W GC A
Sbjct: 55 LQVEEAAGRAAAAVTWLLGEPVLWLGCRA 83
>BC036076-1|AAH36076.1| 350|Homo sapiens KLHDC8A protein protein.
Length = 350
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 268 TGIIMGSRVIVGGPRQKSKVVHPYQFLLTDRASITRTRHIPTKMRDPLHVPSQNH 104
T + GS++ V G RQ V+ ++ + S T+ +IP K V NH
Sbjct: 169 TSFLRGSKIYVLGGRQSKYAVNAFEVFDIETRSWTKFPNIPYKRAFSSFVTLDNH 223
>AK025808-1|BAB15241.1| 497|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22155 fis, clone HRC00205. ).
Length = 497
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 73 LAVEEGAGSGSDFVTAHGGDPASWWGCVA 159
L VEE AG + VT G+P W GC A
Sbjct: 55 LQVEEAAGRAAAAVTWLLGEPVLWLGCRA 83
>AK001610-1|BAA91787.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ10748 fis, clone NT2RP3001819, weakly similar to
RING CANAL PROTEIN. ).
Length = 350
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 268 TGIIMGSRVIVGGPRQKSKVVHPYQFLLTDRASITRTRHIPTKMRDPLHVPSQNH 104
T + GS++ V G RQ V+ ++ + S T+ +IP K V NH
Sbjct: 169 TSFLRGSKIYVLGGRQSKYAVNAFEVFDIETRSWTKFPNIPYKRAFSSFVTLDNH 223
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,998,027
Number of Sequences: 237096
Number of extensions: 1585879
Number of successful extensions: 6293
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 5590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6254
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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