Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_M19
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 130 5e-30
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 130 5e-30
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 130 5e-30
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 130 5e-30
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 102 2e-21
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 76 1e-13
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 70 1e-11
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 6.1
AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein. 30 8.1
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 130 bits (314), Expect = 5e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELR 587
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++
Sbjct: 132 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVK 191
Query: 586 ENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRD 407
TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +
Sbjct: 192 SVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPE 248
Query: 406 IATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 311
++ E+L Y EDIE L FD+
Sbjct: 249 MSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 130 bits (314), Expect = 5e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELR 587
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++
Sbjct: 131 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVK 190
Query: 586 ENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRD 407
TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +
Sbjct: 191 SVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPE 247
Query: 406 IATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 311
++ E+L Y EDIE L FD+
Sbjct: 248 MSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 279
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 130 bits (314), Expect = 5e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELR 587
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++
Sbjct: 132 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVK 191
Query: 586 ENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRD 407
TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +
Sbjct: 192 SVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPE 248
Query: 406 IATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 311
++ E+L Y EDIE L FD+
Sbjct: 249 MSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 130 bits (314), Expect = 5e-30
Identities = 69/152 (45%), Positives = 94/152 (61%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELR 587
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++
Sbjct: 132 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVK 191
Query: 586 ENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRD 407
TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +
Sbjct: 192 SVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPE 248
Query: 406 IATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 311
++ E+L Y EDIE L FD+
Sbjct: 249 MSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 102 bits (244), Expect = 2e-21
Identities = 49/90 (54%), Positives = 64/90 (71%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELR 587
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++
Sbjct: 137 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVK 196
Query: 586 ENTIEELMRPHLVIYLDLPVSKVQEAIKKR 497
TI + + PHLVIY+D+PV +VQ I+K+
Sbjct: 197 SVTICDYLPPHLVIYIDVPVPEVQRRIQKK 226
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 76.2 bits (179), Expect = 1e-13
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 27/179 (15%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRS---TYY 596
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K S T++
Sbjct: 132 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCESALQTHF 191
Query: 595 ---------ELRENTIEELM---------RPHLVIYLDLPVSKVQEAIKKRALSH----- 485
+L + EE++ +P + Y ++ + + + + +
Sbjct: 192 WTGVAGASGKLESGSSEEVLLINERGGRSKPGVDHYNEVKSVTICDYLPPHLVIYIDVPV 251
Query: 484 -EVTSKALTPAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 311
E +T A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 252 PEPHEMKITSAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 310
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = -1
Query: 766 QIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRS 605
Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K S
Sbjct: 132 QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 6.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 572 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 468
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 625 GSLSSTSSWYSSSSSRSASRSYSRSWSRSRSRRRS 659
>AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein.
Length = 90
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 572 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 468
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 7 GSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRS 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,001,476
Number of Sequences: 237096
Number of extensions: 2221971
Number of successful extensions: 4718
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4713
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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