Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M06
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879...    29   2.9  
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605...    29   2.9  
04_04_0861 + 28836544-28836609,28838191-28838264,28838551-288386...    28   9.0  
01_07_0252 - 42296138-42296281,42296527-42296613,42297043-422971...    28   9.0  

>03_05_0223 -
           22087076-22087340,22087448-22087726,22087808-22087950,
           22088029-22088133,22088272-22088465,22088561-22088753,
           22088893-22089202,22089335-22089558,22089862-22089990,
           22090019-22090078,22090426-22090617,22091463-22091522,
           22091606-22091688,22092473-22092611,22092949-22093083,
           22093187-22093462
          Length = 928

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 321 SWVCSISLPCNTFSLKICPTDLMFWQAYLITS 416
           S++CS+ L     S K CP  ++F Q+ L+TS
Sbjct: 657 SFLCSMVLVATKESKKFCPEAVVFLQSLLVTS 688


>03_02_0162 +
           6053144-6053365,6053474-6053548,6054477-6054623,
           6054749-6055300,6055387-6055622,6055914-6056130
          Length = 482

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 741 GAIQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQWMEARNFKP 613
           GA++ A  L  G   V +L DS   +++ F +DQ++      P
Sbjct: 431 GAVRVAQDLGPGHTIVTILCDSGMRHLSKFFNDQYLANHGLTP 473


>04_04_0861 +
           28836544-28836609,28838191-28838264,28838551-28838671,
           28838832-28839143,28839241-28839345,28839447-28839901,
           28840116-28840417,28840589-28840767,28841256-28841446,
           28841595-28841728,28841875-28842113
          Length = 725

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 260 PLLSYLLE*SHLKIYSQVFIRYQTSKWKFLVCKKCYILFKWCSLK 126
           P L+ LL+ +  KIYS  F +     W   +    Y+L+ W S K
Sbjct: 418 PALAGLLQ-TRFKIYSLTFDQSTLPGWVMCIAWLVYLLWLWISFK 461


>01_07_0252 -
           42296138-42296281,42296527-42296613,42297043-42297135,
           42297267-42297341,42297480-42297575,42297987-42298133,
           42298225-42298296,42298912-42298959,42299507-42299607,
           42300226-42300337,42300506-42300590,42300693-42300848,
           42300956-42301047,42301155-42301238,42301676-42301726,
           42302227-42302295,42302417-42302476,42303305-42303535
          Length = 600

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 700 VCGAITGQHSKLYDXIHI 647
           VCG I G+H K+ D IH+
Sbjct: 205 VCGEILGKHDKINDMIHM 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,298,837
Number of Sequences: 37544
Number of extensions: 345188
Number of successful extensions: 694
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)