Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M06
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...   102   4e-22
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...   102   4e-22
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...   102   4e-22
M22567-1|AAB59247.1|  340|Drosophila melanogaster guanine nucleo...    31   1.7  
AY058566-1|AAL13795.1|  340|Drosophila melanogaster LD25526p pro...    31   1.7  
AE014298-2263|AAS65363.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  
AE014298-2262|AAS65362.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  
AE014298-2261|AAS65361.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  
AE014298-2260|AAS65360.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  
AE014298-2259|AAN09370.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  
AE014298-2258|AAF48530.1|  340|Drosophila melanogaster CG10545-P...    31   1.7  

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score =  102 bits (245), Expect = 4e-22
 Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
 Frame = -3

Query: 738 AIQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQWMEARNFKPLIKNDKLLWWDKHLTQ-D 562
           A++ A  LK+GQ+CVV+LPD IRNYMT F+SD WMEARNFK  +      WW   + + +
Sbjct: 326 ALEHARKLKKGQRCVVILPDGIRNYMTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELE 385

Query: 561 MVRPTKSISHYSTTAYAIATLKENPTPLLNVTG-DNGSLVGLLTADNVRKKLSNMLAKTS 385
           +  P   +   +T   AIA +K++    L V   D+GS++G++  + +  ++ +M  + S
Sbjct: 386 LPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQS 445

Query: 384 DPLDKFLVKKYYKVDLSNKPSLGLVSRMLDI 292
           DP  K L K+   + L+    LG ++R+L++
Sbjct: 446 DPAIKALNKRV--IRLNESEILGKLARVLEV 474


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score =  102 bits (245), Expect = 4e-22
 Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
 Frame = -3

Query: 738 AIQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQWMEARNFKPLIKNDKLLWWDKHLTQ-D 562
           A++ A  LK+GQ+CVV+LPD IRNYMT F+SD WMEARNFK  +      WW   + + +
Sbjct: 326 ALEHARKLKKGQRCVVILPDGIRNYMTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELE 385

Query: 561 MVRPTKSISHYSTTAYAIATLKENPTPLLNVTG-DNGSLVGLLTADNVRKKLSNMLAKTS 385
           +  P   +   +T   AIA +K++    L V   D+GS++G++  + +  ++ +M  + S
Sbjct: 386 LPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQS 445

Query: 384 DPLDKFLVKKYYKVDLSNKPSLGLVSRMLDI 292
           DP  K L K+   + L+    LG ++R+L++
Sbjct: 446 DPAIKALNKRV--IRLNESEILGKLARVLEV 474


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score =  102 bits (245), Expect = 4e-22
 Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
 Frame = -3

Query: 738 AIQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQWMEARNFKPLIKNDKLLWWDKHLTQ-D 562
           A++ A  LK+GQ+CVV+LPD IRNYMT F+SD WMEARNFK  +      WW   + + +
Sbjct: 326 ALEHARKLKKGQRCVVILPDGIRNYMTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELE 385

Query: 561 MVRPTKSISHYSTTAYAIATLKENPTPLLNVTG-DNGSLVGLLTADNVRKKLSNMLAKTS 385
           +  P   +   +T   AIA +K++    L V   D+GS++G++  + +  ++ +M  + S
Sbjct: 386 LPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQS 445

Query: 384 DPLDKFLVKKYYKVDLSNKPSLGLVSRMLDI 292
           DP  K L K+   + L+    LG ++R+L++
Sbjct: 446 DPAIKALNKRV--IRLNESEILGKLARVLEV 474


>M22567-1|AAB59247.1|  340|Drosophila melanogaster guanine
           nucleotide-binding regulatoryprotein protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AY058566-1|AAL13795.1|  340|Drosophila melanogaster LD25526p
           protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2263|AAS65363.1|  340|Drosophila melanogaster CG10545-PF,
           isoform F protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2262|AAS65362.1|  340|Drosophila melanogaster CG10545-PE,
           isoform E protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2261|AAS65361.1|  340|Drosophila melanogaster CG10545-PD,
           isoform D protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2260|AAS65360.1|  340|Drosophila melanogaster CG10545-PC,
           isoform C protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2259|AAN09370.1|  340|Drosophila melanogaster CG10545-PB,
           isoform B protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


>AE014298-2258|AAF48530.1|  340|Drosophila melanogaster CG10545-PA,
           isoform A protein.
          Length = 340

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 735 IQAAXSLKEGQKCVVLLPDSIRNYMTXFISDQW-MEARNFKPLIKNDKLLWWDKHLTQDM 559
           +QAA SL+   +  +    ++R ++    +  W  ++RN     ++ KL+ WD H T  +
Sbjct: 31  LQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV 90

Query: 558 VRPTKSISHYSTTAYA 511
                  S   T AYA
Sbjct: 91  HAIPLRSSWVMTCAYA 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,996,889
Number of Sequences: 53049
Number of extensions: 646515
Number of successful extensions: 1665
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)