Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M04
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P...    29   5.0  

>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
           protein.
          Length = 1698

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
 Frame = +2

Query: 209 SANQGGATVASGDILNNSIN*HTSLQPD---TLHSFQNCYVHMIFTSYTSAISVSLPTTT 379
           +A +G  T   G   +++ + HT+   +   T+ +        I T++TS+  +S  TTT
Sbjct: 497 AAKEGSGTGGGGGASSSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSASTTT 556

Query: 380 CCLLQMDTFSTCPPYKMALLLLPSIMVLLKHTLLY 484
             +    T +  PP       +PS+ V + H+  Y
Sbjct: 557 ATINATSTAAAAPP------PVPSVCVRVPHSPSY 585


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,377,604
Number of Sequences: 53049
Number of extensions: 503338
Number of successful extensions: 937
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)