Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M02
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64...    41   9e-04
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690...    30   1.2  

>06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-648352,
            649088-649798,649944-650674,650942-651017,651096-651182,
            651429-651517,651917-651973,652402-652510,652590-652649,
            652835-652919,653178-653242,653694-653753,653869-653913,
            654697-654800,654877-655099
          Length = 1156

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 458  AQYQLPGETFSSPIICDDHVFIGCRNDLLYSLKIDT 351
            A   LPG+ FSSP++    +F+GCR+D L+ L I +
Sbjct: 1121 AAIDLPGDIFSSPLMVGGRIFVGCRDDQLHCLTISS 1156


>03_06_0517 +
           34466743-34466879,34468478-34468588,34468997-34469079,
           34469287-34469404,34469503-34469714,34470167-34470651,
           34470731-34470801,34470898-34470955,34471161-34471192,
           34471193-34471449,34471820-34471974,34472353-34472636,
           34472725-34472842,34473574-34473756,34473848-34474162
          Length = 872

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 587 LHWKTRVSSPVYSTPTIFNDKLILAASTDGKLWVI 483
           L W+T VSS +Y+TP      LI   ++DGKL V+
Sbjct: 62  LRWQTEVSSSIYATP------LIADINSDGKLEVV 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,972,709
Number of Sequences: 37544
Number of extensions: 272939
Number of successful extensions: 562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)