Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M02
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025084-1|ABE73255.1|  910|Drosophila melanogaster IP14863p pro...    69   4e-12
AJ245708-1|CAB53510.1|  824|Drosophila melanogaster peptide synt...    69   4e-12
AE014134-1518|AAS64740.1|  824|Drosophila melanogaster CG13401-P...    69   4e-12
AE014134-1517|AAF52679.3| 1012|Drosophila melanogaster CG13401-P...    69   4e-12

>BT025084-1|ABE73255.1|  910|Drosophila melanogaster IP14863p protein.
          Length = 910

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = -3

Query: 587  LHWKTRVSSPVYSTPTIF----NDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSP 420
            LHWK  V +P+Y+TPT+     N  L+  A+TDG++ +I+   G +    +LPG+ FSS 
Sbjct: 828  LHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLINLRNGEIQWSDKLPGQVFSSA 887

Query: 419  IICDD--HVFIGCRNDLLYSLKI 357
               +D   VF+GCR++ LY L I
Sbjct: 888  CFIEDLRRVFVGCRDNFLYCLGI 910



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 590 SLHWKTRVSSPVYSTPTIFND--KLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
           S+ W  +   PV+STP +      + L+A   G++   H   G + A +   G  FSS +
Sbjct: 729 SVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHACHVGNGKILATFSTEGNIFSSLV 788

Query: 416 ICDDHVFIG 390
           +     F+G
Sbjct: 789 VKTPPTFMG 797


>AJ245708-1|CAB53510.1|  824|Drosophila melanogaster peptide
           synthetase, putative protein.
          Length = 824

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = -3

Query: 587 LHWKTRVSSPVYSTPTIF----NDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSP 420
           LHWK  V +P+Y+TPT+     N  L+  A+TDG++ +I+   G +    +LPG+ FSS 
Sbjct: 742 LHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLINFRNGEIQWSDKLPGQVFSSA 801

Query: 419 IICDD--HVFIGCRNDLLYSLKI 357
              +D   VF+GCR++ LY L I
Sbjct: 802 CFIEDLRRVFVGCRDNFLYCLGI 824



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 590 SLHWKTRVSSPVYSTPTIFND--KLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
           S+ W  +   PV+STP +      + L+A   G++   H   G + A +   G  FSS +
Sbjct: 643 SVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHACHVGNGKILATFSTEGNIFSSLV 702

Query: 416 ICDDHVFIG 390
           +     F+G
Sbjct: 703 VKTPPTFMG 711


>AE014134-1518|AAS64740.1|  824|Drosophila melanogaster CG13401-PB,
           isoform B protein.
          Length = 824

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = -3

Query: 587 LHWKTRVSSPVYSTPTIF----NDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSP 420
           LHWK  V +P+Y+TPT+     N  L+  A+TDG++ +I+   G +    +LPG+ FSS 
Sbjct: 742 LHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLINFRNGEIQWSDKLPGQVFSSA 801

Query: 419 IICDD--HVFIGCRNDLLYSLKI 357
              +D   VF+GCR++ LY L I
Sbjct: 802 CFIEDLRRVFVGCRDNFLYCLGI 824



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 590 SLHWKTRVSSPVYSTPTIFND--KLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
           S+ W  +   PV+STP +      + L+A   G++   H   G + A +   G  FSS +
Sbjct: 643 SVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHACHVGNGKILATFSTEGNIFSSLV 702

Query: 416 ICDDHVFIG 390
           +     F+G
Sbjct: 703 VKTPPTFMG 711


>AE014134-1517|AAF52679.3| 1012|Drosophila melanogaster CG13401-PA,
            isoform A protein.
          Length = 1012

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = -3

Query: 587  LHWKTRVSSPVYSTPTIF----NDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSP 420
            LHWK  V +P+Y+TPT+     N  L+  A+TDG++ +I+   G +    +LPG+ FSS 
Sbjct: 930  LHWKVDVGAPIYATPTLLTVQPNGLLVWCAATDGRVMLINFRNGEIQWSDKLPGQVFSSA 989

Query: 419  IICDD--HVFIGCRNDLLYSLKI 357
               +D   VF+GCR++ LY L I
Sbjct: 990  CFIEDLRRVFVGCRDNFLYCLGI 1012



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 590  SLHWKTRVSSPVYSTPTIFND--KLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
            S+ W  +   PV+STP +      + L+A   G++   H   G + A +   G  FSS +
Sbjct: 831  SVEWTQKFREPVFSTPVLLESVSNIFLSAEVAGRVHACHVGNGKILATFSTEGNIFSSLV 890

Query: 416  ICDDHVFIG 390
            +     F+G
Sbjct: 891  VKTPPTFMG 899


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,886,896
Number of Sequences: 53049
Number of extensions: 494613
Number of successful extensions: 1012
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)