Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_M02
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82078-2|CAD54160.1|  714|Caenorhabditis elegans Hypothetical pr...    35   0.052
Z82078-1|CAB04944.2|  707|Caenorhabditis elegans Hypothetical pr...    35   0.052
AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z82078-2|CAD54160.1|  714|Caenorhabditis elegans Hypothetical
           protein W09D6.1b protein.
          Length = 714

 Score = 34.7 bits (76), Expect = 0.052
 Identities = 17/82 (20%), Positives = 38/82 (46%)
 Frame = -3

Query: 596 QPSLHWKTRVSSPVYSTPTIFNDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
           QP + W   +   +     +  + L++ AS  G +  ++ + G +  + +        PI
Sbjct: 530 QPKMRWAVDLRKCIDGNLLVICNTLVVCASHAGIVIAVNPQTGNLIWRAECGVRFECKPI 589

Query: 416 ICDDHVFIGCRNDLLYSLKIDT 351
           + +D V +GC++  LY + + T
Sbjct: 590 LVNDQVVLGCKSTGLYFICVKT 611


>Z82078-1|CAB04944.2|  707|Caenorhabditis elegans Hypothetical
           protein W09D6.1a protein.
          Length = 707

 Score = 34.7 bits (76), Expect = 0.052
 Identities = 17/82 (20%), Positives = 38/82 (46%)
 Frame = -3

Query: 596 QPSLHWKTRVSSPVYSTPTIFNDKLILAASTDGKLWVIHSELGTVTAQYQLPGETFSSPI 417
           QP + W   +   +     +  + L++ AS  G +  ++ + G +  + +        PI
Sbjct: 530 QPKMRWAVDLRKCIDGNLLVICNTLVVCASHAGIVIAVNPQTGNLIWRAECGVRFECKPI 589

Query: 416 ICDDHVFIGCRNDLLYSLKIDT 351
           + +D V +GC++  LY + + T
Sbjct: 590 LVNDQVVLGCKSTGLYFICVKT 611


>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 106 IQIYLNIIVSFKEYGSKPDLNKG**LTCYLSKMSFRRVL*LPMEY--KVNNSFF 261
           +Q Y +II   K++GS+P       LTC   KM FRRV+   +EY  K +N+ F
Sbjct: 52  MQKYSDII---KDFGSQPKQV----LTCDACKMFFRRVVTEKLEYTCKCSNNCF 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,848,771
Number of Sequences: 27780
Number of extensions: 277163
Number of successful extensions: 604
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)