Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L24
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p pro... 227 9e-60
AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA... 227 9e-60
BT003595-1|AAO39598.1| 494|Drosophila melanogaster GM20958p pro... 32 0.54
AE013599-1414|AAF58558.4| 494|Drosophila melanogaster CG33964-P... 32 0.54
BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p pro... 30 2.2
AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA... 30 2.2
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro... 29 5.1
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA... 29 5.1
BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p pro... 28 6.7
>AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p
protein.
Length = 149
Score = 227 bits (554), Expect = 9e-60
Identities = 106/135 (78%), Positives = 121/135 (89%)
Frame = -2
Query: 460 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 281
MK N V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 101
H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 61 HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120
Query: 100 RRAKGRLAALGKXQG 56
RR KGRLAALGK +G
Sbjct: 121 RRGKGRLAALGKDKG 135
>AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA
protein.
Length = 149
Score = 227 bits (554), Expect = 9e-60
Identities = 106/135 (78%), Positives = 121/135 (89%)
Frame = -2
Query: 460 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 281
MK N V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60
Query: 280 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 101
H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 61 HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120
Query: 100 RRAKGRLAALGKXQG 56
RR KGRLAALGK +G
Sbjct: 121 RRGKGRLAALGKDKG 135
>BT003595-1|AAO39598.1| 494|Drosophila melanogaster GM20958p
protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 7 ICLRGLHGCGSFLGVFTLXLCQVQPVCPLLCDRG 108
ICL GLH CG+ L L + Q C LLC+ G
Sbjct: 263 ICLTGLHTCGN-LAATCLQVFHAQTDCRLLCNVG 295
>AE013599-1414|AAF58558.4| 494|Drosophila melanogaster CG33964-PA,
isoform A protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 7 ICLRGLHGCGSFLGVFTLXLCQVQPVCPLLCDRG 108
ICL GLH CG+ L L + Q C LLC+ G
Sbjct: 263 ICLTGLHTCGN-LAATCLQVFHAQTDCRLLCNVG 295
>BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p
protein.
Length = 478
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 307 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 218
D V + RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
>AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA,
isoform A protein.
Length = 478
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 307 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 218
D V + RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
Length = 2019
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/98 (23%), Positives = 42/98 (42%)
Frame = -2
Query: 448 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 269
++ SS R ++R+ S + + + SS ++ + ++ K +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771
Query: 268 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 155
GK+ R V Q ++ + A A G PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809
>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
protein.
Length = 2019
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/98 (23%), Positives = 42/98 (42%)
Frame = -2
Query: 448 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 269
++ SS R ++R+ S + + + SS ++ + ++ K +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771
Query: 268 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 155
GK+ R V Q ++ + A A G PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809
>BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p protein.
Length = 1316
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 172 HMLLHHWPFLFESSQCIQQTFYDTPASLCQPVD 270
H+L + WP +FE+S + Q F D+ L P D
Sbjct: 1266 HLLNYVWPNIFETSPHLVQAFMDSVDGLGCPWD 1298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,860,789
Number of Sequences: 53049
Number of extensions: 487684
Number of successful extensions: 1269
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -