Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L23
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 285 4e-77
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 284 6e-77
06_01_0539 + 3869156-3869908 145 4e-35
06_01_0529 + 3831100-3831852 145 4e-35
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 131 5e-31
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 118 5e-27
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 118 5e-27
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 115 4e-26
06_01_0479 + 3419657-3420337 111 6e-25
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 102 4e-22
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 99 3e-21
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 79 4e-15
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 58 8e-09
11_04_0445 + 17818190-17818874,17819730-17819749 31 1.0
04_03_0147 - 11853940-11854128,11854933-11855013,11855501-118555... 30 2.4
08_01_0643 - 5565687-5566365,5567679-5568040 28 7.3
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539... 28 9.7
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 285 bits (698), Expect = 4e-77
Identities = 147/233 (63%), Positives = 175/233 (75%), Gaps = 1/233 (0%)
Frame = -2
Query: 768 ARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVR 589
ARYDRAITVFSPDGHL QVEYA EAVRKG+ A VEKKS KLQ+ R++R
Sbjct: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMR 131
Query: 588 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQ 409
KI LD H+ +A AGL ADAR+LINRA++ECQSH+LTVEDPVT+EYITRYIAGL+QKYTQ
Sbjct: 132 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQ 191
Query: 408 SNGRRPFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 232
S G RPFG+S LI GFD Y P L+QT+PSG + WKANATGR++ ++REFLEKNY D
Sbjct: 192 SGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KD 250
Query: 231 EVATENGAVKLAIRALLEVVQSGQKNLEIAVMRRGQPMQMLDLDTINSYVSVI 73
E +KLAIRALLEVV+SG KN+EIAVM ++ L+ I+ YV+ I
Sbjct: 251 TSGKE--TIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEI 301
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 284 bits (696), Expect = 6e-77
Identities = 145/233 (62%), Positives = 175/233 (75%), Gaps = 1/233 (0%)
Frame = -2
Query: 768 ARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVR 589
ARYDRAITVFSPDGHL QVEYA EAVRKG+ A VEKKS KLQ+ R+VR
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVR 61
Query: 588 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQ 409
KI LD H+ +A AGL ADAR+LINRA++ECQSH+LTVED VT+EYITRYIAGL+QKYTQ
Sbjct: 62 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQ 121
Query: 408 SNGRRPFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 232
S G RPFG+S LI GFD Y P L+QT+PSG + WKANATGR++ ++REFLEKNY
Sbjct: 122 SGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY--- 178
Query: 231 EVATENGAVKLAIRALLEVVQSGQKNLEIAVMRRGQPMQMLDLDTINSYVSVI 73
+ + +KLAIRALLEVV+SG KN+EIAVM + ++ L+ I+ YV+ I
Sbjct: 179 KETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEI 231
>06_01_0539 + 3869156-3869908
Length = 250
Score = 145 bits (351), Expect = 4e-35
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = -2
Query: 774 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKL-QEER 598
MS RYD T+FSP+G L QVEYA EA+ +A EKK +KL Q R
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 597 TVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 418
+ K+ +D H+ A AG+ +DA IL+N A++ Q + L+ ++P+ +E + + + KQ
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 417 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYT 238
YTQ G RPFG+S L G+D L+ ++PSG Y WKA A G +++ + L+++Y
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 237 ADEVATENGAVKLAIRALLEVVQS 166
+ T AV LA++ L + + S
Sbjct: 181 --DGMTREEAVALALKVLSKTMDS 202
>06_01_0529 + 3831100-3831852
Length = 250
Score = 145 bits (351), Expect = 4e-35
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = -2
Query: 774 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKL-QEER 598
MS RYD T+FSP+G L QVEYA EA+ +A EKK +KL Q R
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 597 TVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 418
+ K+ +D H+ A AG+ +DA IL+N A++ Q + L+ ++P+ +E + + + KQ
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 417 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYT 238
YTQ G RPFG+S L G+D L+ ++PSG Y WKA A G +++ + L+++Y
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 237 ADEVATENGAVKLAIRALLEVVQS 166
+ T AV LA++ L + + S
Sbjct: 181 --DGMTREEAVALALKVLSKTMDS 202
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 131 bits (317), Expect = 5e-31
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Frame = -2
Query: 762 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVRKI 583
YDR + FSP+G L QVEYA EA++ GSTA VEK+ + L E +V KI
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKI 80
Query: 582 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 403
+D+H+ A +GL ADAR L+ A++E Q+H+ + +P+T+E T+ I L ++ + +
Sbjct: 81 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 140
Query: 402 GR---RPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 241
RPFG+S LI G D +G P L+ T+PSG +++ A A G ++ L++ Y
Sbjct: 141 EESMSRPFGVSLLIAGHDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQY 196
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 118 bits (284), Expect = 5e-27
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = -2
Query: 633 EKKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLE 454
EKK + L +E +V+KI L ++ + ++G+ D R+L+ +++ + Q + ++ + +
Sbjct: 109 EKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVT 168
Query: 453 YITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSA 274
+ R A + Q++TQS G RPFG+S LI G+D D P L+Q +PSG Y+ WKA+A G++
Sbjct: 169 QLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNV 227
Query: 273 KTVREFLEKNYTADEVATENGAVKLAIRALLEVV--QSGQKNLEIAVMRRGQPMQMLDLD 100
+ FLEK YT D + A+ AI L E Q N+EI ++R + ++L
Sbjct: 228 SNAKTFLEKRYTEDMELDD--AIHTAILTLKEGYEGQISANNIEIGIIRSDREFKVLSPA 285
Query: 99 TINSYVSVI 73
I ++ +
Sbjct: 286 EIKDFLEEV 294
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 118 bits (284), Expect = 5e-27
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = -2
Query: 633 EKKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLE 454
EKK + L +E +V+KI L ++ + ++G+ D R+L+ +++ + Q + ++ + +
Sbjct: 72 EKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVT 131
Query: 453 YITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSA 274
+ R A + Q++TQS G RPFG+S LI G+D D P L+Q +PSG Y+ WKA+A G++
Sbjct: 132 QLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNV 190
Query: 273 KTVREFLEKNYTADEVATENGAVKLAIRALLEVV--QSGQKNLEIAVMRRGQPMQMLDLD 100
+ FLEK YT D + A+ AI L E Q N+EI V+R + ++L
Sbjct: 191 SNAKTFLEKRYTEDMELDD--AIHTAILTLKEGYEGQISANNIEIGVIRSDREFKVLTPA 248
Query: 99 TINSYVSVI 73
I ++ +
Sbjct: 249 EIKDFLEEV 257
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 115 bits (277), Expect = 4e-26
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 4/236 (1%)
Frame = -2
Query: 768 ARYDRAITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXVEKKSVAKLQEERTV 592
A YDR IT+FSP+G L QVEYA +AV+ G T+ +KK KL + +V
Sbjct: 7 AGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
Query: 591 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYT 412
+ + ++ + GLTADAR L+ +A+ E + + ++ + ++IA Q YT
Sbjct: 67 THLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYT 126
Query: 411 QSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 232
Q RP G+ ++ G+D + + LF+ +P+G ++ KA + G + FLEK D
Sbjct: 127 QHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDD 186
Query: 231 EVATENGAVKLAIRALLEVVQSGQK--NLEIAVMRR-GQPMQMLDLDTINSYVSVI 73
+ V++AI AL V+Q K +E+ V+R+ + + L + I+ +++ I
Sbjct: 187 PQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTAI 242
>06_01_0479 + 3419657-3420337
Length = 226
Score = 111 bits (267), Expect = 6e-25
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Frame = -2
Query: 699 EAVRKGSTAXXXXXXXXXXXXVEKKSVAKL-QEERTVRKICLLDDHVVMAFAGLTADARI 523
EA+ +A EKK +KL Q R+ K+ +D H+ A AG+ +DA I
Sbjct: 2 EAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANI 61
Query: 522 LINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSP 343
L+N A++ Q + L+ ++P+ +E + + + KQ YTQ G RPFG+S L G+D
Sbjct: 62 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 121
Query: 342 HLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIRALLEVVQS 166
L+ ++PSG Y WKA A G +++ + L+++Y + T AV LA++ L + + S
Sbjct: 122 QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR--DGLTREEAVALALKVLSKTMDS 178
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 102 bits (244), Expect = 4e-22
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Frame = -2
Query: 762 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVRKI 583
YD ++T FSPDG + QVEYA +AV T VEK +K+ E + R+I
Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
Query: 582 CLLDDHV--------VMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGL 427
+ H VMA AGL AD R +++RA+ E S++ +P++++ + +A
Sbjct: 68 HSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASY 127
Query: 426 KQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK 247
T RPFG ++GG+D DG P L+ EPSG+ Y++ A G+ + + +EK
Sbjct: 128 VHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 186
Query: 246 NYTADEVATENGAVKLA 196
E+ G V++A
Sbjct: 187 -LKLSELTCREGIVEVA 202
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 99.1 bits (236), Expect = 3e-21
Identities = 57/182 (31%), Positives = 93/182 (51%)
Frame = -2
Query: 762 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVRKI 583
YD ++T FSPDG + QVEYA +AV T VEK +K+ + + R++
Sbjct: 8 YDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSNRRL 67
Query: 582 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 403
+ H +A AGL AD R +++RA+ E S++ +P+ ++ + +A T
Sbjct: 68 HSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYW 127
Query: 402 GRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVA 223
RPFG ++GG+D DG P L+ EPSG+ Y++ A G+ + + + D+ A
Sbjct: 128 WLRPFGCGVILGGYDRDG-PQLYMIEPSGLSYKYFGAALGKGRQAAKTCVYDGSRKDDSA 186
Query: 222 TE 217
E
Sbjct: 187 FE 188
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 79.0 bits (186), Expect = 4e-15
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Frame = -2
Query: 699 EAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARIL 520
EAV++GS K+ ++L + RK+ + DH +A AGLTAD R+L
Sbjct: 2 EAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ--RKVFRVADHAGVALAGLTADGRVL 59
Query: 519 INRAQIECQSHKLTVEDPVTLEYIT----------RYIAGLK-----------------Q 421
+ EC +H + P+ + + YI G+ Q
Sbjct: 60 SRFLRSECINHAFVYDAPLPVSRLALRLADKAQPDMYIFGITICPTTFLWIMSVSLMVLQ 119
Query: 420 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 241
TQ + +RP+G+ L+ G D G+ HL+ PSG Y+E++A A G ++ + FLE+ +
Sbjct: 120 VCTQRSWKRPYGVGLLVAGLDESGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRF 178
Query: 240 TADEVATENGAVKLAIRALLEVVQSGQK----NLEIAVMRRG-----QPMQMLDLDTINS 88
T +K A+ A+ E +Q G+K N +A++ R +P +M+D+ I
Sbjct: 179 EGYNDYTPEQLIKDALSAIKETLQ-GEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQE 237
Query: 87 YV 82
+
Sbjct: 238 II 239
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 58.0 bits (134), Expect = 8e-09
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = -2
Query: 615 KLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYI 436
KL + T+ + + D + + G+ D R + A+ + ++ + ++I
Sbjct: 117 KLHDPTTITNLFAITDRIGLLATGMPGDGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWI 176
Query: 435 AGLKQKYTQSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVRE 259
A Q TQ RP+G+ +I G D + G+P LF +P+G ++ KA + G K V
Sbjct: 177 ADRAQIRTQHAQIRPYGVVSMIFGIDEEKGTPELFTCDPAGQFFAHKATSAGPKEKEVMN 236
Query: 258 FLEK 247
FLE+
Sbjct: 237 FLEE 240
>11_04_0445 + 17818190-17818874,17819730-17819749
Length = 234
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = -2
Query: 540 TADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP--FGISCLIG 367
TA R+L + V + T+E + ++ G++ + Q R+P I CL+
Sbjct: 135 TAAIRMLAYGTPADLMDETFGVAESTTMECMINFVQGVRHIFGQQYLRKPNEQDIQCLLQ 194
Query: 366 GFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKN 244
+ G P + + +++EW+ + R+ LE N
Sbjct: 195 QGEAHGFPGMLGSLDC-MHWEWQNCPVAWKGQFTRDLLEHN 234
>04_03_0147 -
11853940-11854128,11854933-11855013,11855501-11855584,
11855663-11855735,11855888-11855949,11856246-11856327,
11857643-11858262
Length = 396
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 342 HLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 235
+LF +EP ++ KA++T R KT+ FLE+ A
Sbjct: 311 NLFHSEPGNGLWKRKADSTLRHCKTLESFLEETLDA 346
>08_01_0643 - 5565687-5566365,5567679-5568040
Length = 346
Score = 28.3 bits (60), Expect = 7.3
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 451 YYKIHSRPQTEIYSEQWSS 395
YY ++S P+ +YS++W+S
Sbjct: 292 YYSVYSDPEYSMYSDEWTS 310
>07_03_1614 +
28152812-28153204,28153301-28153585,28153676-28153993,
28154657-28154884,28155390-28155490,28156204-28156321,
28156445-28156726
Length = 574
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 624 SVAKLQEERTVRKIC---LLDDHVVMAFAGLTADARILINRAQIECQSHKL 481
+V KL T R C L+ D++V AGL A I Q++C H+L
Sbjct: 184 NVIKLDGLVTSRMSCSLYLVFDYMVHDLAGLAASPEIKFTLPQVKCYVHQL 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,070,287
Number of Sequences: 37544
Number of extensions: 350710
Number of successful extensions: 756
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -