BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L17
(856 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069677-1|AAL39822.1| 442|Drosophila melanogaster LD45245p pro... 29 8.1
AE014297-1536|AAF54827.1| 442|Drosophila melanogaster CG5961-PA... 29 8.1
>AY069677-1|AAL39822.1| 442|Drosophila melanogaster LD45245p
protein.
Length = 442
Score = 29.1 bits (62), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 560 HNYRFIFGNIDRVSLNACFVSKTS 489
H++R +F DRV N C++SKT+
Sbjct: 251 HSWRDMFIRRDRVLFNGCYISKTT 274
>AE014297-1536|AAF54827.1| 442|Drosophila melanogaster CG5961-PA
protein.
Length = 442
Score = 29.1 bits (62), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 560 HNYRFIFGNIDRVSLNACFVSKTS 489
H++R +F DRV N C++SKT+
Sbjct: 251 HSWRDMFIRRDRVLFNGCYISKTT 274
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,381,604
Number of Sequences: 53049
Number of extensions: 725709
Number of successful extensions: 1307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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