Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_L17
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   2.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.3  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   8.3  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -1

Query: 412 VTSDESICVKFSCYIFCVTVKCRASRVTRVHVSRGGRGQLIAPCTASPDSVCWMRNFKLA 233
           +TS +S  V+      C        +  R H+++  +         S   VCW+  F LA
Sbjct: 333 MTSTKSTIVRNHLNSTCSVTNSPHQKKLRFHLAKERKASTTLGIIMSAFIVCWLPFFVLA 392

Query: 232 L 230
           L
Sbjct: 393 L 393


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 744 GTKRSTTTPVAVCVYNNNVFQSHIDXQSRTYRI 842
           GT     T +  C Y  N+F    D   R YR+
Sbjct: 147 GTIGIGNTTIQACPYTLNIFDLTSDKLLRQYRL 179


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 AIKFLSSFYTITFKTLQSLYIGLLVFDTKQAFNDTLSILP 540
           ++  LSSFY  T  +LQ +   L   +  Q +N+ L+  P
Sbjct: 72  SVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQP 111


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 AIKFLSSFYTITFKTLQSLYIGLLVFDTKQAFNDTLSILP 540
           ++  LSSFY  T  +LQ +   L   +  Q +N+ L+  P
Sbjct: 87  SVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQP 126


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 785 HTHCNRCSSGTFCTFNVCFKF 723
           + HCNRC+S      N    F
Sbjct: 62  NNHCNRCTSRQIGIANTLIPF 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,134
Number of Sequences: 438
Number of extensions: 4983
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)