Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L14
(795 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 2.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 4.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 4.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 4.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 4.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 4.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 4.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 4.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 4.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 4.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 5.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 10.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 10.0
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 10.0
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = -1
Query: 498 EDFHALAAFAEDIKSTGLSNIVIITNNFSILSARLNLVLSLPRVEAS 358
E+F +L ++++T ++NI+ + N + NL LSLP+++++
Sbjct: 489 EEFQSLNNAVGEMEATNVTNILSMDNT------QYNLDLSLPQLDST 529
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHDFQHTSSR 230
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 205 SLRNRTHGFQHTSSR 219
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHGFQHTSSR 230
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHGFQHTSSR 230
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 205 SLRNRTHGFQHTSSR 219
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHGFQHTSSR 230
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 205 SLRNRTHGFQHTSSR 219
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 221 SLRNRTHGFQHTSSR 235
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHGFQHTSSR 230
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 312 SLRNRTH*AQHGQHR 356
SLRNRTH QH R
Sbjct: 216 SLRNRTHGFQHTSSR 230
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 609 SALDVRLSPSVHQKFVYWHK 668
S +D+ +V QKF++W+K
Sbjct: 67 SNMDMYKDKNVVQKFLWWYK 86
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 609 SALDVRLSPSVHQKFVYWHK 668
S +D+ +V QKF++W+K
Sbjct: 67 SNMDMYKDKNVVQKFLWWYK 86
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 763 YREFK*IRPADESFYSRHGRHEDFRCSHRNXGLCQYTN 650
+R+F DESF R R C R + ++ N
Sbjct: 426 WRQFLYCLAGDESFRKRRQREAAGNCRKRGEKIARHIN 463
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 10.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 765 TIGNLNEFGRPMNHFTAGTDVMKIFVVLTAI 673
T GNL P +FT D M + L+AI
Sbjct: 343 TAGNLATREHPSRNFTMSEDGMIEVIPLSAI 373
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 10.0
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -3
Query: 301 QWTCRHKQP 275
QWTCR +P
Sbjct: 486 QWTCRQPEP 494
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.4 bits (43), Expect = 10.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 612 ALDVRLSPSVHQKFVYW 662
ALD + P H +YW
Sbjct: 24 ALDCSIKPKDHNGSIYW 40
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,637
Number of Sequences: 438
Number of extensions: 4271
Number of successful extensions: 35
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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