Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_L10
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57...    31   0.96 
06_03_1510 + 30665857-30666038,30666137-30666236,30666358-306664...    29   3.9  
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764...    28   5.1  
10_08_0704 - 20018477-20018542,20018693-20018704,20018731-200189...    27   8.9  
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    27   8.9  

>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
            579266-579370,579975-580028,580244-580344,580454-581423,
            582030-582203,582341-582643,582719-582856,582993-583247,
            584230-584370,585008-585289,585395-585540,585627-585690,
            585723-585799,586285-586301,587728-587867,587972-588029,
            588121-588218,588727-588776,589260-589743
          Length = 2630

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
 Frame = -1

Query: 172  TSPLNISEASISKQ---SEPAKKKLLFLRTNLTVMSQIHQQQKEQLL 41
            T PL ++    + Q    EP K +L  L+    V+S++H+Q+++QLL
Sbjct: 2302 TQPLPVAPLVFNYQRFSDEPLKNELERLKHTSNVLSKVHEQKRKQLL 2348


>06_03_1510 +
           30665857-30666038,30666137-30666236,30666358-30666438,
           30666514-30666618,30666722-30666916,30667440-30667501,
           30667870-30667885,30668007-30668068,30668933-30668951
          Length = 273

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 177 IHTCLAFVFLCWSYLDSFVITTPIFKWLDILTTRWQRYNN 296
           +H CLAF+F   ++L +F   + +     IL +RW R+++
Sbjct: 12  LHCCLAFLFKFLAFLQAFAAVSALLYAAWIL-SRWARHHH 50


>05_06_0033 +
           25074301-25074393,25074680-25075203,25076367-25076442,
           25076549-25076641,25077167-25077253,25077338-25078095,
           25078447-25078575,25079145-25079265
          Length = 626

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 218 VAPAQEHKGKASVYCHITP*YI*SKYK*TIRTSKKKTVVPEDKFDSDES-NSPATEGATV 42
           +AP     GK +   H+ P ++ +     + ++ K +++P +K +  E    PA  G   
Sbjct: 377 IAPPPLKNGKIAPGMHLKPIHLKNNGTGKVSSNGKASIIPGNKLEVSEGLTLPAVNGRDS 436

Query: 41  DXG*EKKKMNAD 6
               E  KMNA+
Sbjct: 437 GKYAEPGKMNAN 448


>10_08_0704 -
           20018477-20018542,20018693-20018704,20018731-20018927,
           20018928-20018999,20019159-20021289
          Length = 825

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 516 CELLNLSFLYLHSDRYIGGWKKCIWS 593
           C+LL+L  LYL +++  G    C W+
Sbjct: 508 CQLLSLKILYLSNNKLTGKLPDCWWN 533


>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
            3384640-3384709,3385878-3386002,3387128-3387268,
            3387362-3387519,3387644-3387803,3390136-3390213,
            3390326-3390385,3390473-3390528,3391886-3392090,
            3394107-3394192,3394296-3394406,3394536-3394607,
            3395453-3395538,3395730-3395878,3396107-3396250,
            3396335-3396442,3396997-3397027,3397609-3397713,
            3398283-3398407,3398807-3398950,3399073-3399177,
            3400748-3400799,3401549-3401696,3401936-3402130,
            3402404-3402647,3403152-3403259,3403887-3404034,
            3405467-3405525,3405876-3405945,3407008-3407333,
            3407666-3409204,3410526-3410733,3410870-3410906,
            3411024-3411072,3411143-3411271
          Length = 2025

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -2

Query: 582  IFSILLYTYRYEG----IKKIGLRVHIAGKLHGELYAIQDNELHQMNS 451
            IF++L    RY+     +  + LRVH+ G+      A  DN  H+ +S
Sbjct: 911  IFNLLSSAARYQAQRADVALVWLRVHLPGEQSTRAQADSDNSAHEQSS 958


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,079,515
Number of Sequences: 37544
Number of extensions: 286101
Number of successful extensions: 721
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)