Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_L09
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    30   0.056
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   2.8  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.4  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   6.4  
AY146733-1|AAO12093.1|  131|Anopheles gambiae odorant-binding pr...    23   8.4  
AJ697724-1|CAG26917.1|  131|Anopheles gambiae putative odorant-b...    23   8.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.4  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 30.3 bits (65), Expect = 0.056
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -1

Query: 374 IPKIIPKDSYPSGWVPPKEEALNHPYFLSRTKNAELPIYLKITXQGNA*NIHNKKN*RRH 195
           +  ++PK+S P+G+        NHP+ L    N  L +++ I   G +     K N RR 
Sbjct: 675 LESLLPKESEPAGFSLSATLFTNHPHRLEIIPNL-LRVFVSIEMTGQSVQFEQKFNYRRP 733

Query: 194 M 192
           M
Sbjct: 734 M 734


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 317 EALNHPYFLSRTKNAELPIYLKI 249
           + +NHP  L++T  A   +YLKI
Sbjct: 336 DTINHPSQLAKTSLAPTIVYLKI 358


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 49  FLNGVLYSSSQCCNPI 2
           +++G+LY  S C NP+
Sbjct: 315 YISGILYYLSTCINPL 330


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 500 SKHYSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLP 384
           SKH+  +  +   +K++  +   IE    EW Y+ R++P
Sbjct: 178 SKHFLPWCTTGGTKKLRTLHKKLIEDGAEEW-YLVRIVP 215


>AY146733-1|AAO12093.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP23 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 307 TIHTF-YQEQKMLSYLSIXXXXXRGMRKISIIRKIEGDIWLLNDEIKQYLK 158
           ++H F  ++QKM+S  ++      G+   S+ +  +GD+   +   K ++K
Sbjct: 16  SVHAFTLRQQKMVSIFALECMAETGIGAESLTKLRDGDLTANDRTAKCFMK 66


>AJ697724-1|CAG26917.1|  131|Anopheles gambiae putative
           odorant-binding protein OBPjj14 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 307 TIHTF-YQEQKMLSYLSIXXXXXRGMRKISIIRKIEGDIWLLNDEIKQYLK 158
           ++H F  ++QKM+S  ++      G+   S+ +  +GD+   +   K ++K
Sbjct: 16  SVHAFTLRQQKMVSIFALECMAETGIGAESLTKLRDGDLTANDRTAKCFMK 66


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 535 APKSSELFKIRPFFPTKSRANAECVR 612
           A K  EL ++RP +    R   EC R
Sbjct: 338 AEKEKELEQVRPRYEAMRRKEEECSR 363



 Score = 23.0 bits (47), Expect = 8.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -2

Query: 286  EQKMLSYLSIXXXXXRGMRKISIIRKIEGDIWLLNDEIKQYLKQKNKRYVETRVHE 119
            E + ++ LS        +  I  I+K +   + L DEI Q L  +++  V   +HE
Sbjct: 1092 EMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRSAVADMIHE 1147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,957
Number of Sequences: 2352
Number of extensions: 13487
Number of successful extensions: 62
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)