Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L03
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 28 7.6
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 28 7.6
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 28 7.6
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 28 7.6
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 28 7.6
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 28 7.6
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 28 7.6
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 28 7.6
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 28 7.6
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 28 7.6
AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein. 28 7.6
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -3
Query: 297 KDHGIFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVVLREFN-GR 121
K H + C RRRSRS R +RG R + G + S SP R + R
Sbjct: 112 KGHYAYDCHRYSRRRRSRS-RSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRR 170
Query: 120 KHYIKVDCRRHDSTNSVRHYISLSKTR 40
+ R S R++ S S++R
Sbjct: 171 SRSASLRRSRSGSIKGSRYFQSPSRSR 197
>AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein.
Length = 1111
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 165 HCSFSPVVLREFNGRKHYIKVD 100
HC+ +PV++R F R+ +K D
Sbjct: 273 HCTLAPVLIRRFKEREENVKAD 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,371,166
Number of Sequences: 237096
Number of extensions: 1139743
Number of successful extensions: 2069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -