BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_L01
(663 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.0
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 4.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 4.5
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 4.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 4.5
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 6.0
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 6.0
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.0
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 7.9
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 25 WLSTLRLPHPRLQTESMP 78
++S R PHPRL+ E+ P
Sbjct: 104 YISQPRPPHPRLRREAEP 121
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 25 WLSTLRLPHPRLQTESMP 78
++S R PHPRL+ E+ P
Sbjct: 160 YISQPRPPHPRLRREAEP 177
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 249 RPPHPRLRREAKP 261
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 53 RPPHPRLRREAEP 65
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 193 RPPHPRLRREAEP 205
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 221 RPPHPRLRREAEP 233
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 251 LSNTTAIAEAWARLDHKFD 195
L+NT + W LD+ FD
Sbjct: 32 LTNTLNVIHKWKYLDYDFD 50
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 339 NRFQGRYQLPA 307
NRF G Y++PA
Sbjct: 435 NRFSGEYEIPA 445
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 378 QNQAYYPIRRLVSNRFQGRYQ 316
Q +A+Y +R +N FQ +YQ
Sbjct: 17 QAKAHYSLRDFKANIFQVKYQ 37
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 137 RPPHPRLRREAKP 149
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 25 RPPHPRLRREAEP 37
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 53 RPPHPRLRREAEP 65
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 81 RPPHPRLRREAEP 93
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 109 RPPHPRLRREAEP 121
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 165 RPPHPRLRREAEP 177
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 434 MLYRGDVVPKDVNAAIAT 381
M+Y G V D+NA IAT
Sbjct: 319 MMYLGTPVMPDLNALIAT 336
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 54 RPPHPRLRREAEP 66
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 82 RPPHPRLRREAEP 94
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 110 RPPHPRLRREAEP 122
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 40 RLPHPRLQTESMP 78
R PHPRL+ E+ P
Sbjct: 54 RPPHPRLRREAEP 66
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 137 PPPYPHRRTSARKHAWRT 190
P P+P R T A+ H + T
Sbjct: 417 PKPFPRRATLAQLHNFTT 434
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 29 LVLFGSLTLAFRRSPCRLLRNPSR 100
L+L G++ ++PC LL P R
Sbjct: 64 LLLQGNINNQLFQTPCELLNFPKR 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,321
Number of Sequences: 438
Number of extensions: 4746
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -