Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_K18
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 33 0.19
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 33 0.19
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 33 0.19
Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.44
DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isofor... 31 0.44
DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isofor... 31 0.44
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.3
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z82275-1|CAB05237.2| 472|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 27 7.2
Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical ... 27 9.5
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 27 9.5
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -1
Query: 373 GEYSIAYLEARMTRMEDILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFL 194
G + IA LE + LLNKI++ EL++T+ R KKK+ T HT K+
Sbjct: 1655 GGFDIANLEGTLQS----LLNKIEKLEMERNELRDTLARMKKKTTET---HTTINQKETR 1707
Query: 193 YNEISKYL 170
Y I L
Sbjct: 1708 YRNIEDNL 1715
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -1
Query: 373 GEYSIAYLEARMTRMEDILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFL 194
G + IA LE + LLNKI++ EL++T+ R KKK+ T HT K+
Sbjct: 1728 GGFDIANLEGTLQS----LLNKIEKLEMERNELRDTLARMKKKTTET---HTTINQKETR 1780
Query: 193 YNEISKYL 170
Y I L
Sbjct: 1781 YRNIEDNL 1788
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -1
Query: 373 GEYSIAYLEARMTRMEDILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFL 194
G + IA LE + LLNKI++ EL++T+ R KKK+ T HT K+
Sbjct: 1728 GGFDIANLEGTLQS----LLNKIEKLEMERNELRDTLARMKKKTTET---HTTINQKETR 1780
Query: 193 YNEISKYL 170
Y I L
Sbjct: 1781 YRNIEDNL 1788
>Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical
protein F10G8.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = -1
Query: 325 DILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFLYNEISKYLSPDSNSLI 146
DIL+N ID + ++ +++ + K H+ A T++ + F+Y+ I KY+ N L
Sbjct: 269 DILINLIDNRIKNSYSIEWWMLKVRSKRNHS--ALTNQQHS-FIYDIIIKYIRTRHNQLR 325
Query: 145 YXELFISKYA 116
+ E ++ +A
Sbjct: 326 HLEKYLEAHA 335
>DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isoform
protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = -1
Query: 325 DILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFLYNEISKYLSPDSNSLI 146
DIL+N ID + ++ +++ + K H+ A T++ + F+Y+ I KY+ N L
Sbjct: 262 DILINLIDNRIKNSYSIEWWMLKVRSKRNHS--ALTNQQHS-FIYDIIIKYIRTRHNQLR 318
Query: 145 YXELFISKYA 116
+ E ++ +A
Sbjct: 319 HLEKYLEAHA 328
>DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isoform
protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = -1
Query: 325 DILLNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFLYNEISKYLSPDSNSLI 146
DIL+N ID + ++ +++ + K H+ A T++ + F+Y+ I KY+ N L
Sbjct: 262 DILINLIDNRIKNSYSIEWWMLKVRSKRNHS--ALTNQQHS-FIYDIIIKYIRTRHNQLR 318
Query: 145 YXELFISKYA 116
+ E ++ +A
Sbjct: 319 HLEKYLEAHA 328
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/114 (17%), Positives = 45/114 (39%)
Frame = -1
Query: 493 HNNSADKCTNLENIXXTKIMELENSNVTSSLSKDPXLPSIGEYSIAYLEARMTRMEDILL 314
HN++ +K + E+ EN NV+ +++D + + +I +A+ R + +
Sbjct: 85 HNSNMNKENHFEDSWMPMAPITENENVSYGINQDDKMSQAAQSNIPSGKAKTKRERNRIA 144
Query: 313 NKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFLYNEISKYLSPDSNS 152
+ ++ + K + KK H Q + + + L P N+
Sbjct: 145 AAKSRRLEKELMRKTQAIYETKKITHEQLCAYNNSNDSLFKTAVESVLHPCINN 198
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -1
Query: 496 THNNSADKCTNLENIXXTKIMELENSNVTSSLSKDPXLPSIGEYSIA 356
TH +S K +LEN+ + + S++++ + P + +I +Y A
Sbjct: 1644 THQSSITKAPSLENVAKIRQSPVPESHISTLTRRSPSVENIAKYQQA 1690
>Z82275-1|CAB05237.2| 472|Caenorhabditis elegans Hypothetical
protein K01G12.3 protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = -1
Query: 322 ILLNKIDQNSQRIVELKNTVVRSKKKSVH----TQTAHTDETYKKFLYNEISK 176
I+ +++DQN QRI+ +N K + T+ +T E+ ++FLYN I K
Sbjct: 286 IMQSRVDQNFQRILAPENDSWSRDKLQIFRLLLTEEQNTIES-RRFLYNSILK 337
>Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 349 EARMTRMEDILLNKIDQNSQRIVELKNTVVRSKKKS 242
EA++ RMED + K+++ + LK KKKS
Sbjct: 100 EAKIQRMEDAMKKKLEKEQKEKARLKKREETLKKKS 135
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
protein F36D3.5 protein.
Length = 1152
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 316 LNKIDQNSQRIVELKNTVVRSKKKSVHTQTAHTD 215
L+K+D N+ + +KN ++R KK H + D
Sbjct: 423 LSKLDVNTSNAITVKNMLIRDFKKLTHHSYSFID 456
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 304 DQNSQRIVELKNTVVRSKKKSVHTQTAHTDETYKKFLYN 188
DQNS++I +LKN + V T + T + +N
Sbjct: 249 DQNSRKIEDLKNEITLKMNDRVMTHVLRPESTDINYFFN 287
>Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 278 TKKYSCAFKKKISPYSNSSH*RNLQEVPLQ*NIKIPEPR*QQLNL 144
TKK AF K IS Y+NS+ L PL I PE + L+L
Sbjct: 197 TKKEEAAFNKYISIYTNSAVHMFLDLGPLIGKIFAPEGHNKSLSL 241
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 274 KNTVV-RSKKKSVHTQTAHTDETYKKFLYNEISKYL 170
KNTVV + ++++ TQ + KKFLY + KY+
Sbjct: 190 KNTVVLAAAERNLQTQGPQHLKRVKKFLYGQYPKYV 225
>AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 278 TKKYSCAFKKKISPYSNSSH*RNLQEVPLQ*NIKIPEPR*QQLNL 144
TKK AF K IS Y+NS+ L PL I PE + L+L
Sbjct: 197 TKKEEAAFNKYISIYTNSAVHMFLDLGPLIGKIFAPEGHNKSLSL 241
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -1
Query: 409 SSLSKDPXLPSIGEYSIAYLEARMTRMEDILLNKIDQNSQRIVELKNTVVRSKKKSVHTQ 230
S L +G+ L T D ++ +D S + V NT + KS+ T
Sbjct: 12 SKLPDKATFKKLGDLKSLNLGTIATIDVDSIIKSLDDGSDKSVAAVNTTLEEFAKSIATV 71
Query: 229 TAHTDET 209
T+ D+T
Sbjct: 72 TSALDKT 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,548,893
Number of Sequences: 27780
Number of extensions: 193347
Number of successful extensions: 510
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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