Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_K13
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z93385-9|CAB07642.1|  843|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81083-7|CAB03105.1|  843|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z74033-6|CAF31474.1|  321|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical
           protein C05C8.2 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -1

Query: 654 YIIIPAREIIKLYFRLCNNFQI*KQLNNVFYFECS*KSSLVLNLENW 514
           YII+ ARE+IKL  R     Q  + L +  Y E    SS+V N E +
Sbjct: 116 YIIMKAREVIKLLSRSVPYEQAIRVLEDEIYCEIIKISSMVRNKERF 162


>Z93385-9|CAB07642.1|  843|Caenorhabditis elegans Hypothetical
           protein F44F1.7 protein.
          Length = 843

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 666 LHNSYIIIPAREIIKLYFRLCNN 598
           LHN Y+ +P+ ++  LY   CNN
Sbjct: 814 LHNGYMELPSAKVYTLYAMRCNN 836


>Z81083-7|CAB03105.1|  843|Caenorhabditis elegans Hypothetical
           protein F44F1.7 protein.
          Length = 843

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 666 LHNSYIIIPAREIIKLYFRLCNN 598
           LHN Y+ +P+ ++  LY   CNN
Sbjct: 814 LHNGYMELPSAKVYTLYAMRCNN 836


>U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical
           protein F39B3.2 protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 396 IDSYFVAI*CSKNFWYFFVF 337
           I ++ + + CS NFW FFV+
Sbjct: 317 ISNFLIVLNCSSNFWVFFVW 336


>Z74033-6|CAF31474.1|  321|Caenorhabditis elegans Hypothetical
           protein F38B7.8 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = +3

Query: 48  VILLTGTYLLLCTSLVFIYFYNLNT*KICDFHIVY*LKEIAKLRYNIYYVL 200
           ++L+ GT+ ++C SL+   F+N  T +   F+++  L+  +    NIY +L
Sbjct: 20  LLLVIGTFGIVCNSLILYIFFNEKT-ERTSFNLICVLRSFS----NIYILL 65


>AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical
           protein T22B2.3 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -3

Query: 481 KTLFMLIVLPAWLFVLLRLQGRSFYPSNH*FVFCRNIMFKEFLVFFCI*FIDLMQ 317
           K +    +L  +  +L  +Q   F   NH F  CR  +F+    + C  FID ++
Sbjct: 287 KNIIKFFLLSVFCLILFSMQTLFFPNQNHEFFLCRVGIFRTSYNYSC--FIDFLR 339


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,636,901
Number of Sequences: 27780
Number of extensions: 299897
Number of successful extensions: 715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)