Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_K12
(570 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005882-1|AAH05882.1| 285|Homo sapiens vacuolar protein sortin... 61 3e-09
AK022812-1|BAB14255.1| 285|Homo sapiens protein ( Homo sapiens ... 61 3e-09
BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein. 60 4e-09
AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinom... 60 4e-09
AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens ... 60 4e-09
AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein. 60 4e-09
BC067754-1|AAH67754.1| 397|Homo sapiens vacuolar protein sortin... 60 7e-09
AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein pr... 58 2e-08
BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sortin... 56 9e-08
BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sortin... 56 9e-08
BC064621-1|AAH64621.1| 145|Homo sapiens VPS37D protein protein. 50 8e-06
AY081952-1|AAL91075.1| 289|Homo sapiens Williams-Beuren syndrom... 50 8e-06
AL691523-2|CAI17366.1| 143|Homo sapiens KIAA0562 protein. 36 0.076
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein. 32 1.6
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si... 32 1.6
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein. 32 1.6
>BC005882-1|AAH05882.1| 285|Homo sapiens vacuolar protein sorting
37 homolog B (S. cerevisiae) protein.
Length = 285
Score = 60.9 bits (141), Expect = 3e-09
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = -1
Query: 567 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 388
+S+ S +T ALLQ A+ EE ++N+A FL G++ +D F++ ++ RK H+R+ K
Sbjct: 97 QSSSASLETLLALLQAEGAKIEEDTENMAEKFLDGELPLDSFIDVYQSKRKLAHMRRVKI 156
Query: 387 EKMSELLRNSNQNAYGNGATKPYLPY---SNYLPSQNPQ-SLPYPVGPLNMPMP 238
EK+ E++ + P LP + LP P+ S P V P +P P
Sbjct: 157 EKLQEMVLKGQRLPQALAPLPPRLPELAPTAPLPYPAPEASGPPAVAPRRIPPP 210
>AK022812-1|BAB14255.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ12750 fis, clone NT2RP2001168, weakly similar to
VERPROLIN. ).
Length = 285
Score = 60.9 bits (141), Expect = 3e-09
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = -1
Query: 567 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 388
+S+ S +T ALLQ A+ EE ++N+A FL G++ +D F++ ++ RK H+R+ K
Sbjct: 97 QSSSASLETLLALLQAEGAKIEEDTENMAEKFLDGELPLDSFIDVYQSKRKLAHMRRVKI 156
Query: 387 EKMSELLRNSNQNAYGNGATKPYLPY---SNYLPSQNPQ-SLPYPVGPLNMPMP 238
EK+ E++ + P LP + LP P+ S P V P +P P
Sbjct: 157 EKLQEMVLKGQRLPQALAPLPPRLPELAPTAPLPYPAPEASGPPAVAPRRIPPP 210
>BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein.
Length = 174
Score = 60.5 bits (140), Expect = 4e-09
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S S A L+ AA E+EE+SDNIA DFL GKM +D FL F R H R+ K E
Sbjct: 99 SESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE 158
Query: 384 KMSELLRNSNQ 352
K+ + + +Q
Sbjct: 159 KLQQAIAMHSQ 169
>AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinoma
related protein 1 protein.
Length = 397
Score = 60.5 bits (140), Expect = 4e-09
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S S A L+ AA E+EE+SDNIA DFL GKM +D FL F R H R+ K E
Sbjct: 322 SESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE 381
Query: 384 KMSELLRNSNQ 352
K+ + + +Q
Sbjct: 382 KLQQAIAMHSQ 392
>AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ32642 fis, clone SYNOV2001144. ).
Length = 397
Score = 60.5 bits (140), Expect = 4e-09
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S S A L+ AA E+EE+SDNIA DFL GKM +D FL F R H R+ K E
Sbjct: 322 SESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE 381
Query: 384 KMSELLRNSNQ 352
K+ + + +Q
Sbjct: 382 KLQQAIAMHSQ 392
>AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein.
Length = 372
Score = 60.5 bits (140), Expect = 4e-09
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S S A L+ AA E+EE+SDNIA DFL GKM +D FL F R H R+ K E
Sbjct: 297 SESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE 356
Query: 384 KMSELLRNSNQ 352
K+ + + +Q
Sbjct: 357 KLQQAIAMHSQ 367
>BC067754-1|AAH67754.1| 397|Homo sapiens vacuolar protein sorting
37 homolog A (S. cerevisiae) protein.
Length = 397
Score = 59.7 bits (138), Expect = 7e-09
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1
Query: 552 SPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSE 373
S A L+ AA E+EE+SDNIA DFL GKM +D FL F R H R+ K EK+ +
Sbjct: 326 SASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQ 385
Query: 372 LLRNSNQ 352
+ +Q
Sbjct: 386 AIAMHSQ 392
>AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein
protein.
Length = 377
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S+ + P T LLQ + EE+S+ +A FL G++ ++ FLE+F +R H+R+ + E
Sbjct: 114 SSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLETFLENFSSMRMLSHLRRVRVE 173
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP-----YPVGPLNMP 244
K+ E++R + G P P P +PQ P P PL MP
Sbjct: 174 KLQEVVRKPRASQELAGDAPPPRPPPPVRP--DPQGTPPVVEEQPQPPLAMP 223
>BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 56.0 bits (129), Expect = 9e-08
Identities = 34/111 (30%), Positives = 53/111 (47%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S+ + P T LLQ + EE+S+ +A FL G++ ++ FLE+F +R H+R+ + E
Sbjct: 92 SSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLETFLENFSSMRMLSHLRRVRVE 151
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMPMPGM 232
K+ E++R + G P P P PQ P V P M
Sbjct: 152 KLQEVVRKPRASQELAGDAPPPRPPPPVRPV--PQGTPPVVEEQPQPPSAM 200
>BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 56.0 bits (129), Expect = 9e-08
Identities = 34/111 (30%), Positives = 53/111 (47%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S+ + P T LLQ + EE+S+ +A FL G++ ++ FLE+F +R H+R+ + E
Sbjct: 92 SSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLETFLENFSSMRMLSHLRRVRVE 151
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMPMPGM 232
K+ E++R + G P P P PQ P V P M
Sbjct: 152 KLQEVVRKPRASQELAGDAPPPRPPPPVRPV--PQGTPPVVEEQPQPPSAM 200
>BC064621-1|AAH64621.1| 145|Homo sapiens VPS37D protein protein.
Length = 145
Score = 49.6 bits (113), Expect = 8e-06
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -1
Query: 552 SPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSE 373
SP LQ E+E++++ L G+ ++ FL F+ R H+R+ +AEK+ E
Sbjct: 5 SPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQE 64
Query: 372 LLR---NSNQNAYGNGATKP-YLPYSNYLP---SQNPQSLPYPVGPL-NMPMPGMYGN 223
LLR S Q A + A P P + LP ++ P ++P + PL + P+P + G+
Sbjct: 65 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGS 122
>AY081952-1|AAL91075.1| 289|Homo sapiens Williams-Beuren syndrome
critical region protein 24 protein.
Length = 289
Score = 49.6 bits (113), Expect = 8e-06
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -1
Query: 552 SPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSE 373
SP LQ E+E++++ L G+ ++ FL F+ R H+R+ +AEK+ E
Sbjct: 149 SPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSLEAFLPAFQRGRALAHLRRTQAEKLQE 208
Query: 372 LLR---NSNQNAYGNGATKP-YLPYSNYLP---SQNPQSLPYPVGPL-NMPMPGMYGN 223
LLR S Q A + A P P + LP ++ P ++P + PL + P+P + G+
Sbjct: 209 LLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGS 266
>AL691523-2|CAI17366.1| 143|Homo sapiens KIAA0562 protein.
Length = 143
Score = 36.3 bits (80), Expect = 0.076
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -1
Query: 438 EDFEPIR-KQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPYPV 262
ED++ + K+ + +Y+AE +L +S +A + A P LP ++ P N +SLPY
Sbjct: 16 EDYDLAKEKKQQMEQYRAEVYEQLELHSLLDAELHSAVDPLLPATDPHPKINAESLPYDE 75
Query: 261 GPL 253
PL
Sbjct: 76 RPL 78
>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
Length = 2035
Score = 31.9 bits (69), Expect = 1.6
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -1
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPY--PVGPLN-------MPMPGM 232
KM L+ N Y + T+P+ +N LP++ QSL Y PV P N P G
Sbjct: 383 KMLYQLKVVNPQEYSSNCTEPFPNSTNLLPTEISQSLLYRGPVDPANWFGVRKGFPNLGY 442
Query: 231 YGNHF*NILIFLLCVQDVY 175
NH +L+ L+ VY
Sbjct: 443 IQNHL-QVLLLLVFEAIVY 460
>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
similarity 38, member A protein.
Length = 2035
Score = 31.9 bits (69), Expect = 1.6
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -1
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPY--PVGPLN-------MPMPGM 232
KM L+ N Y + T+P+ +N LP++ QSL Y PV P N P G
Sbjct: 383 KMLYQLKVVNPQEYSSNCTEPFPNSTNLLPTEISQSLLYRGPVDPANWFGVRKGFPNLGY 442
Query: 231 YGNHF*NILIFLLCVQDVY 175
NH +L+ L+ VY
Sbjct: 443 IQNHL-QVLLLLVFEAIVY 460
>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
Length = 2090
Score = 31.9 bits (69), Expect = 1.6
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = -1
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPY--PVGPLN-------MPMPGM 232
KM L+ N Y + T+P+ +N LP++ QSL Y PV P N P G
Sbjct: 438 KMLYQLKVVNPQEYSSNCTEPFPNSTNLLPTEISQSLLYRGPVDPANWFGVRKGFPNLGY 497
Query: 231 YGNHF*NILIFLLCVQDVY 175
NH +L+ L+ VY
Sbjct: 498 IQNHL-QVLLLLVFEAIVY 515
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,589,447
Number of Sequences: 237096
Number of extensions: 1386938
Number of successful extensions: 7051
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7051
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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