Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_K12
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 31 0.44
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.58
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 30 1.3
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 30 1.3
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 30 1.3
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 30 1.3
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 29 1.8
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 29 1.8
Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical pr... 29 2.4
U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein. 29 2.4
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 28 5.4
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 28 5.4
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 27 9.5
U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 59.7 bits (138), Expect = 1e-09
Identities = 26/86 (30%), Positives = 53/86 (61%)
Frame = -1
Query: 564 SAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAE 385
S+ S DTT +L+Q AA E+++ ++ + F +G++ V+ FL+ F+ + H+RK K++
Sbjct: 110 SSSKSLDTTSSLMQVAAQEADDDAEALFTQFENGEISVEIFLKQFKDKKTIAHLRKIKSD 169
Query: 384 KMSELLRNSNQNAYGNGATKPYLPYS 307
+++ LLR ++Y P +P++
Sbjct: 170 RLAALLREQTYSSYAQPTVPPPMPHA 195
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -1
Query: 369 LRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMP-MPG 235
+R Q G Y P+ P + Q +PYP P MP PG
Sbjct: 165 MRQQQQQPNGQAPPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPG 210
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 360 SNQNAYGNGATKPYLP-YSN--YLPSQNPQSLPYPVGPLNMPMPGMYGN 223
+ Q +YG P P Y N Y P PQ PYP G P PG N
Sbjct: 9 NQQPSYGGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSN 57
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 360 SNQNAYGNGATKPYLP-YSN--YLPSQNPQSLPYPVGPLNMPMPGMYGN 223
+ Q +YG P P Y N Y P PQ PYP G P PG N
Sbjct: 51 NQQPSYGGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSN 99
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -1
Query: 450 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
+++L+ ++ I+++ K + EK RN+ YG G K S P + P+ +
Sbjct: 9 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 66
Query: 270 YPVGPLNMP 244
+PVG L +P
Sbjct: 67 FPVG-LELP 74
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -1
Query: 450 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
+++L+ ++ I+++ K + EK RN+ YG G K S P + P+ +
Sbjct: 93 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 150
Query: 270 YPVGPLNMP 244
+PVG L +P
Sbjct: 151 FPVG-LELP 158
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -1
Query: 450 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
+++L+ ++ I+++ K + EK RN+ YG G K S P + P+ +
Sbjct: 97 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 154
Query: 270 YPVGPLNMP 244
+PVG L +P
Sbjct: 155 FPVG-LELP 162
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -1
Query: 450 DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
+++L+ ++ I+++ K + EK RN+ YG G K S P + P+ +
Sbjct: 93 ERYLDMYKDIQREQE--KEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIK 150
Query: 270 YPVGPLNMP 244
+PVG L +P
Sbjct: 151 FPVG-LELP 158
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 458
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 458
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 492 DNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAY 343
D + + + + ++ + + + +Q I KY+ +K E LRNS + AY
Sbjct: 289 DRVEKKYNNSVADMNSLPDKSQQLNEQYEIAKYRVDKHYEELRNSIEEAY 338
>Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical
protein F47B10.3 protein.
Length = 380
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 324 PYLPYSNYLPSQNPQSLPYPVGPLNMPMPGMYGN 223
PY P N P PQ + PL +P+P + N
Sbjct: 332 PYFPMPNMYPQAYPQDFQHQYQPLFVPVPMTFYN 365
>U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein.
Length = 551
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 405 IRKYKAEKMSELLRNSNQNA----YGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMP 244
I+ K ++ E RN +NA YG G K S P + P+ + +PVG L +P
Sbjct: 102 IQSMKQKEEEEKRRNDQRNAIGFDYGTGKVKARESDSEDEPFEPPEGIKFPVG-LELP 158
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 333 ATKPYLPYSNYLPSQNPQSLPYPVGPLNMPMPGMYGN 223
A P+ PY+NY P YP ++ P +Y N
Sbjct: 592 AYPPFYPYTNYPNIWQPPYQNYPYNQVDYQQPWLYNN 628
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 447 KFLEDFEPIRKQMHIRKYKAE-KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
K E+ KQ+ K + E ++ E L N + +++G +P P L +N P
Sbjct: 314 KMEEELRKKEKQLEEEKQQMEQRLKEQLSNWH-SSFGPNQPRPPAPLPTDLQLENLGYPP 372
Query: 270 YPVGPLNMPMP 238
P PL P P
Sbjct: 373 SPPAPLAQPTP 383
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 447 KFLEDFEPIRKQMHIRKYKAE-KMSELLRNSNQNAYGNGATKPYLPYSNYLPSQNPQSLP 271
K E+ KQ+ K + E ++ E L N + +++G +P P L +N P
Sbjct: 314 KMEEELRKKEKQLEEEKQQMEQRLKEQLSNWH-SSFGPNQPRPPAPLPTDLQLENLGYPP 372
Query: 270 YPVGPLNMPMP 238
P PL P P
Sbjct: 373 SPPAPLAQPTP 383
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 477 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 367
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 238 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 273
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 477 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 367
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 235 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 270
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical protein
W08D2.7 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 528 LQTAAAESEEQSDNIARDFLSGKMGV--DKFLEDFEPIRKQMHIRKYKAEKMSELLRNSN 355
LQT +E EQ+ N+A+ KM V DK++ F P + + SE+++ ++
Sbjct: 912 LQTCLSELHEQARNVAKVSNECKMEVMEDKYVSSFNPGLMDVVYQWVNGATFSEIVKTTD 971
>U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical
protein F46C8.3 protein.
Length = 201
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 429 EPIRKQMHIRKYKAEKMSEL-LRNSNQNAYGNGATKPYLPYSNYLPSQNPQS 277
EP + H E+ +L RNS+ GNG+ Y PY+N +P++
Sbjct: 110 EPWDRPKHTYSPSIEEKKQLECRNSSPEFKGNGSVN-YKPYTNESTEMSPEN 160
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.1 bits (57), Expect = 9.5
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = -1
Query: 450 DKFLED--FEPIRKQMHIRKYKAEKMSELLRN-SNQNAYGNGATKPYLPYSNYLP----- 295
D +E+ E +++ +R Y A K E LR S N G P LP S+Y P
Sbjct: 706 DALMEESQIEAQKREEMLRMYHACK--EALRIISEVNMSTLGDQPPPLPMSDYRPHPSGP 763
Query: 294 SQNPQSLPYPVGPLNMPMP 238
S P+ P P G PMP
Sbjct: 764 SPVPRPAPAPPGGRQAPMP 782
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.1 bits (57), Expect = 9.5
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = -1
Query: 450 DKFLED--FEPIRKQMHIRKYKAEKMSELLRN-SNQNAYGNGATKPYLPYSNYLP----- 295
D +E+ E +++ +R Y A K E LR S N G P LP S+Y P
Sbjct: 706 DALMEESQIEAQKREEMLRMYHACK--EALRIISEVNMSTLGDQPPPLPMSDYRPHPSGP 763
Query: 294 SQNPQSLPYPVGPLNMPMP 238
S P+ P P G PMP
Sbjct: 764 SPVPRPAPAPPGGRQAPMP 782
>U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical
protein C28H8.5a protein.
Length = 302
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 105 ILMKFPVCKVNYMLSISKQNLFDIDVHLLTI 13
IL K+P C + LS+S N DVHL I
Sbjct: 20 ILPKYPGCPFSLNLSLSFLNFTHYDVHLQMI 50
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 363 NSNQNAYGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMPMPGMY 229
N N N NG P PY P PYP G P PG +
Sbjct: 274 NGNGNNGNNGNGHPQYPYPVPPHGYYPPGYPYPPG-YPYPPPGAF 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,791,606
Number of Sequences: 27780
Number of extensions: 232597
Number of successful extensions: 697
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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