Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_K04
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023848-1|BAB14700.1| 1867|Homo sapiens protein ( Homo sapiens ...    28   9.8  
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B...    28   9.8  
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.     28   9.8  

>AK023848-1|BAB14700.1| 1867|Homo sapiens protein ( Homo sapiens cDNA
            FLJ13786 fis, clone PLACE4000654, highly similar to Mus
            musculus mRNA for ubiquitin conjugating enzyme. ).
          Length = 1867

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 292  KDDKEDTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMT 143
            KDDKE      K+K KAE+  +     D NY  +   GL  ++KR +S T
Sbjct: 898  KDDKEKKNHEEKEKVKAENGFQ-----D-NYSVVVASGLKSQSKRAVSAT 941


>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
            BIR-domain enzyme APOLLON protein.
          Length = 4829

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 292  KDDKEDTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMT 143
            KDDKE      K+K KAE+  +     D NY  +   GL  ++KR +S T
Sbjct: 3860 KDDKEKKNHEEKEKVKAENGFQ-----D-NYSVVVASGLKSQSKRAVSAT 3903


>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
          Length = 2793

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 292  KDDKEDTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMT 143
            KDDKE      K+K KAE+  +     D NY  +   GL  ++KR +S T
Sbjct: 1824 KDDKEKKNHEEKEKVKAENGFQ-----D-NYSVVVASGLKSQSKRAVSAT 1867


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,482,255
Number of Sequences: 237096
Number of extensions: 325511
Number of successful extensions: 1366
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)