BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_K03
(420 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 176 3e-44
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 176 3e-44
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 176 3e-44
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 176 3e-44
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 176 3e-44
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 176 3e-44
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 176 3e-44
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 174 9e-44
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 174 1e-43
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 165 5e-41
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 163 3e-40
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 5e-12
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.024
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 30 3.6
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 30 3.6
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 30 3.6
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 30 3.6
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 29 4.8
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 29 8.4
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 29 8.4
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 29 8.4
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 29 8.4
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 9e-44
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSC IHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAG 105
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 174 bits (423), Expect = 1e-43
Identities = 80/105 (76%), Positives = 90/105 (85%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 105
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 165 bits (401), Expect = 5e-41
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKL KLHYCVSC IHSKVVRNRS++ R+ RTPP P G
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAG 105
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 163 bits (395), Expect = 3e-40
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 176
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 175 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP P G
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFRPAG 105
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 69.3 bits (162), Expect = 5e-12
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -3
Query: 172 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP*G 41
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P G
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAG 44
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3
Query: 244 KFVIRNIVEAAAVRDINDASVY 179
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.024
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 355 MTRKRRNGGRAKHGRGHVK 299
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 283 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 104
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 103 R 101
R
Sbjct: 409 R 409
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 259 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 98
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 283 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 104
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 103 R 101
R
Sbjct: 409 R 409
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 283 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 104
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 103 R 101
R
Sbjct: 409 R 409
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 259 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 98
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 212 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 325
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 212 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 325
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 212 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 325
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 212 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 325
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,199,796
Number of Sequences: 237096
Number of extensions: 1122220
Number of successful extensions: 2597
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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