Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_K01
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 186 3e-48
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 158 6e-40
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 157 2e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 139 3e-34
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 123 2e-29
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 109 4e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 95 8e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 72 9e-14
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.4
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.2
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.2
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.3
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.6
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 26 5.6
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 5.6
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 186 bits (453), Expect = 3e-48
Identities = 85/117 (72%), Positives = 93/117 (79%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 490
Y GS HRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSMANAG +T
Sbjct: 46 YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNT 105
Query: 489 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 319
NGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 106 NGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 158 bits (384), Expect = 6e-40
Identities = 74/115 (64%), Positives = 87/115 (75%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 490
YKGS HRVI NFMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +T
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110
Query: 489 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 325
NGSQFFITTV T LDG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 111 NGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 157 bits (380), Expect = 2e-39
Identities = 69/95 (72%), Positives = 80/95 (84%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 490
Y+GSI HRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+
Sbjct: 71 YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDS 130
Query: 489 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 385
NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 131 NGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 139 bits (337), Expect = 3e-34
Identities = 64/119 (53%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGAD 493
YK S HR+I FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D
Sbjct: 55 YKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKD 114
Query: 492 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 319
+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 115 SNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 123 bits (297), Expect = 2e-29
Identities = 58/96 (60%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 493
Y G I HRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 492 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 385
TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 97 TNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 109 bits (262), Expect = 4e-25
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 493
Y +I HR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +
Sbjct: 491 YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 492 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 382
TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 550 TNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 95.1 bits (226), Expect = 8e-21
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 493
Y+ +I HR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 492 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 349
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 71.7 bits (168), Expect = 9e-14
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -1
Query: 669 YKGSIXHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMANAGAD 493
Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA +
Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 492 TNGSQFFITTVKTSWLDGRHVVFGNVV 412
N SQFFIT T +G+ +FG VV
Sbjct: 108 GNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 359 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 445
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 487 WFPVLHHHC 461
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 325 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 483
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 392 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 541
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 615 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 469
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 128 VCSLLHFCY-YIFISTSSLAVCLDLNNSHYRRPLFISTYYA 9
VC +H + YI++ SS A LDL + L S YA
Sbjct: 51 VCCFIHNVFPYIYVEYSSFAETLDLEVPDFLSQLQTSINYA 91
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 374 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 553
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 554 SSSNL 568
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,675,712
Number of Sequences: 5004
Number of extensions: 55237
Number of successful extensions: 138
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -