Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_J21
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 159 2e-39
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 159 2e-39
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 59 4e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 58 6e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 58 1e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 56 3e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 56 3e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 55 5e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 7e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 2e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 53 3e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 53 3e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 53 3e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 52 4e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 52 4e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 52 4e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 52 6e-07
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 52 6e-07
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 52 6e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 50 2e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 50 2e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 50 2e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 49 5e-06
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 49 5e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 46 3e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 46 4e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 7e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 7e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 41 0.001
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 40 0.002
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.006
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.006
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 36 0.045
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.14
Z73425-3|CAA97785.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 33 0.24
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.24
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 33 0.32
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 30 1.7
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.0
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 29 3.9
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 29 3.9
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 29 3.9
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 29 3.9
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z69635-5|CAA93458.1| 350|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 5.2
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 28 6.9
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 6.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 6.9
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL032633-4|CAN86635.1| 179|Caenorhabditis elegans Hypothetical ... 28 9.1
AL032633-3|CAA21598.1| 210|Caenorhabditis elegans Hypothetical ... 28 9.1
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 159 bits (386), Expect = 2e-39
Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 8/263 (3%)
Frame = -3
Query: 809 DQFNXGRYQIIVASDEK-----ALEKPDGGILPIEXRTXXXXXXXXXXXXXXSGVSRGID 645
+QFN G YQI++ASD L++ G + SGVSRGID
Sbjct: 314 NQFNEGSYQIVIASDVSDADGSKLKEEIAGKSDEKPEKDEKKGKKASKLDKESGVSRGID 373
Query: 644 FQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLSNGFKG 465
F HVSNV+NFDFP ++Y+HR GRTARG N+G+ LSF E+ ++ +++ + N G
Sbjct: 374 FHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQEEI-NQQMG 432
Query: 464 QKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLKEIKQELLNCKKLQGYFEENPS 285
+KVLQ YEF ++E++ F R+R+A T+ +++ARLKEI+QEL+ LQ +F +N
Sbjct: 433 RKVLQPYEFRIKELDTFLLRTREALSKCTKGVIKKARLKEIRQELMRSANLQTFFAKNER 492
Query: 284 DLAALRRDKALHTVKVQQ-HLAHVPEYLLPAALRNEDIVEDQETVTEKPQVKKRKQN--A 114
+ ++ D +K+ +A V Y++P ALR D P K R+ N
Sbjct: 493 EKLLMQTDCHPVMLKINSPAIADVTSYMVPEALRGMDF--------SAPGAKNRRYNMGQ 544
Query: 113 NFGSAKRHKYQARQNDPXKSFDV 45
+HK+Q + DP K+F +
Sbjct: 545 KHRQKLKHKFQKKGKDPLKTFKI 567
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 159 bits (386), Expect = 2e-39
Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 8/263 (3%)
Frame = -3
Query: 809 DQFNXGRYQIIVASDEK-----ALEKPDGGILPIEXRTXXXXXXXXXXXXXXSGVSRGID 645
+QFN G YQI++ASD L++ G + SGVSRGID
Sbjct: 381 NQFNEGSYQIVIASDVSDADGSKLKEEIAGKSDEKPEKDEKKGKKASKLDKESGVSRGID 440
Query: 644 FQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLSNGFKG 465
F HVSNV+NFDFP ++Y+HR GRTARG N+G+ LSF E+ ++ +++ + N G
Sbjct: 441 FHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQEEI-NQQMG 499
Query: 464 QKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLKEIKQELLNCKKLQGYFEENPS 285
+KVLQ YEF ++E++ F R+R+A T+ +++ARLKEI+QEL+ LQ +F +N
Sbjct: 500 RKVLQPYEFRIKELDTFLLRTREALSKCTKGVIKKARLKEIRQELMRSANLQTFFAKNER 559
Query: 284 DLAALRRDKALHTVKVQQ-HLAHVPEYLLPAALRNEDIVEDQETVTEKPQVKKRKQN--A 114
+ ++ D +K+ +A V Y++P ALR D P K R+ N
Sbjct: 560 EKLLMQTDCHPVMLKINSPAIADVTSYMVPEALRGMDF--------SAPGAKNRRYNMGQ 611
Query: 113 NFGSAKRHKYQARQNDPXKSFDV 45
+HK+Q + DP K+F +
Sbjct: 612 KHRQKLKHKFQKKGKDPLKTFKI 634
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 59.3 bits (137), Expect = 3e-09
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFV 528
SRGID +++V+N+DFP+D+ YVHR GRT R +G +SF+
Sbjct: 399 SRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFL 442
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
SRG+D HV V+N + P +Y+HR GR+AR GS LSFV+ + L+ AVEQ +
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 479 NGFKGQKVLQKY 444
KV K+
Sbjct: 458 KKLDELKVSPKH 469
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIR-EKPLMDAVEQHL 483
S+G+DFQ + +VINFD P D+ +YVHR GRT R +G +F++ + E ++ ++Q L
Sbjct: 502 SKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLL 561
Query: 482 SNGFKGQKVLQKYEFALEEVEG 417
+ GQ++ + + + EG
Sbjct: 562 AEA--GQELPEFLKMLAGDEEG 581
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/121 (30%), Positives = 57/121 (47%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
SRG+D + V VIN + P + Y+HR GRTAR G +S V E+ L+ + S
Sbjct: 478 SRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEIVN--S 535
Query: 479 NGFKGQKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLKEIKQELLNCKKLQGYF 300
N + L++ A E VE +R R + + +I + KE++ + K Q
Sbjct: 536 N---ADRTLKQRLVAPEVVEAYRRRIDELEETIQQIDEEDRAEKELRIAEASMAKTQNAL 592
Query: 299 E 297
E
Sbjct: 593 E 593
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 578 AGRTARGNNQGSVLSFVSIREKPLMDAVEQHLSNGFKGQK 459
AG+ A+ + S S S+R+ PL++A + + KGQK
Sbjct: 679 AGKAAQNKKKASSNSKTSLRDIPLVNAGSRGVQKAQKGQK 718
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
SRG+D HV V+N + P +Y+HR GR+AR GS LSFV+ + L+ AVEQ +
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 479 NGFKGQKV 456
KV
Sbjct: 458 KKLDELKV 465
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIRE 516
V RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S+ +
Sbjct: 623 VERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIRE 516
V RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S+ +
Sbjct: 623 VERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHL 483
++RGID Q V+ VINFDFP + +Y+HR GR+ R + G ++ ++ ++ + +EQ L
Sbjct: 340 LTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQEL 399
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS-IREKPLMDAVEQH 486
SRG+DF+H+ VI D P ++ Y+HR GR+AR ++ G+ L VS +E+ ++ +E+H
Sbjct: 383 SRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKLEKH 441
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREK 513
+RG+D +V +VIN+D P DV+ YVHR GRT R N G SF + + +
Sbjct: 488 ARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNR 536
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RG+D HV VIN+D P YVHR GRTAR G ++ V+ + +E +L
Sbjct: 344 ARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLG 403
Query: 479 NGFKGQKVLQKYEFALEE 426
K ++ L E
Sbjct: 404 KKLDEYKCVENEVMVLVE 421
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS 711
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS 711
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS 711
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS 922
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS 922
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V +VIN+D P +++ Y+HR GRT R N G SF+S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS 922
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQH 486
++RGID Q VS VIN+D P + +Y+HR GR+ R +G ++FV+ + + +E +
Sbjct: 328 LARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 386
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQH 486
++RGID Q VS VIN+D P + +Y+HR GR+ R +G ++FV+ + + +E +
Sbjct: 41 LARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 99
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQH 486
++RGID Q VS VIN+D P + +Y+HR GR+ R +G ++FV+ + + +E +
Sbjct: 328 LARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 386
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHL 483
+ RG+D V VIN+D P + SY+HR GRT R G +++ + + + ++ +
Sbjct: 435 LGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVI 494
Query: 482 -SNGFKGQKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLKEIKQELLNCKKL 312
+GF + +Y +++V SRD + + + A + ++ +K++++ KK+
Sbjct: 495 RQSGFD----VPEYLMEMKKV------SRDRKKDMLKHAPKRHKIAIVKEQVIKKKKM 542
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREK 513
+RG+D +V +VIN+D P D + YVHR GRT R N G SF + + +
Sbjct: 459 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 507
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREK 513
+RG+D +V +VIN+D P D + YVHR GRT R N G SF + + +
Sbjct: 443 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 491
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREK 513
+RG+D +V +VIN+D P D + YVHR GRT R N G SF + + +
Sbjct: 440 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 488
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/61 (31%), Positives = 39/61 (63%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RG+D + VINFD D++++VHR GRT R ++G+ + V+ ++ ++ + ++L
Sbjct: 571 ARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLE 630
Query: 479 N 477
+
Sbjct: 631 S 631
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RG+D VS VIN+D P + Y+HR GR+ R +G ++FV + ++ +EQ+ S
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RG+D VS VIN+D P + Y+HR GR+ R +G ++FV + ++ +EQ+ S
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQH 486
++RGID + VI FD P + +VHRAGRTAR +G+ L ++ + ++ ++ H
Sbjct: 319 MARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGNALILIASEQLAYVNFLDNH 377
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSF 531
+RG+D + VIN+D+P + YVHR GRT R + +G+ +F
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTF 479
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V+ V N+D P D +SY+HR R R +G ++FVS
Sbjct: 345 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVS 388
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RG+D + V+ V N+D P D +SY+HR R R +G ++FVS
Sbjct: 337 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVS 380
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFV 528
+RG+D Q + +VI++ P V Y+HR+GRTAR +++G + V
Sbjct: 334 ARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 377
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFV 528
+RG+D Q + +VI++ P V Y+HR+GRTAR +++G + V
Sbjct: 501 ARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 544
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 656 RGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVS 525
RGID + VS V+N+D + Y HR GRT R G ++F++
Sbjct: 635 RGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLT 678
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLM------- 504
++RG D V VIN++ P D +VHRAGRT R G V+S K L
Sbjct: 459 LARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRLFVKMLKVT 518
Query: 503 ----DAVEQHLSNGFKGQKVLQKYEFALEEVE 420
D VE+ + + +K + +Y ALE ++
Sbjct: 519 NLWGDTVEEQMEE-YIFEKDMDRYSKALESLK 549
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLM 504
+RG+D + VIN FP +VHR GR AR G+ +S ++ E P +
Sbjct: 326 ARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYL 377
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLM 504
+RG+D + VIN FP +VHR GR AR G+ +S ++ E P +
Sbjct: 326 ARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYL 377
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFV 528
+RG+D +++ V+N+D P YVHR GRT R +G +FV
Sbjct: 613 ARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFV 656
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREK 513
V+RG+D Q V VI+ P + + YVHR GR R G +S VS E+
Sbjct: 565 VARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLSISLVSEYEE 614
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/91 (23%), Positives = 47/91 (51%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RGID +V+ V+N D + +Y HR GR AR G+ ++ + A++ +
Sbjct: 320 ARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDER-----ALKGFTA 374
Query: 479 NGFKGQKVLQKYEFALEEVEGFRYRSRDAWR 387
++G+ +++ + E+ G ++++ W+
Sbjct: 375 LAYRGKVTVKRVVEGVHELPGDLVKNQEFWK 405
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/91 (23%), Positives = 47/91 (51%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLS 480
+RGID +V+ V+N D + +Y HR GR AR G+ ++ + A++ +
Sbjct: 320 ARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDER-----ALKGFTA 374
Query: 479 NGFKGQKVLQKYEFALEEVEGFRYRSRDAWR 387
++G+ +++ + E+ G ++++ W+
Sbjct: 375 LAYRGKVTVKRVVEGVHELPGDLVKNQEFWK 405
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPL 507
+RG+D V ++ +D + Y+HR GRTARG N GS + + +R + L
Sbjct: 375 ARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTN-GSGKALLVLRPEEL 424
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFP-----LDVNSYVHRAGRTARGNNQ--GSVLSFV 528
+SRGID + VINFD P ++++HRAGRT R + G +SFV
Sbjct: 706 LSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFV 757
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.5 bits (78), Expect(2) = 0.006
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNS---YVHRAGRTARGNNQGSVLSFVSI 522
+RG++ + +V+N+D P D N YV+R GRT R G+ +FV +
Sbjct: 1063 ARGLNIAGLDHVVNYDMP-DKNGFDEYVNRIGRTGRAGFTGTSTAFVDV 1110
Score = 21.8 bits (44), Expect(2) = 0.006
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 809 DQFNXGRYQIIVASD 765
D F G+YQ +VAS+
Sbjct: 1046 DDFRRGKYQCMVASN 1060
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 35.5 bits (78), Expect(2) = 0.006
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPLDVNS---YVHRAGRTARGNNQGSVLSFVSI 522
+RG++ + +V+N+D P D N YV+R GRT R G+ +FV +
Sbjct: 1063 ARGLNIAGLDHVVNYDMP-DKNGFDEYVNRIGRTGRAGFTGTSTAFVDV 1110
Score = 21.8 bits (44), Expect(2) = 0.006
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 809 DQFNXGRYQIIVASD 765
D F G+YQ +VAS+
Sbjct: 1046 DDFRRGKYQCMVASN 1060
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQ 549
+ G+D + + VI FD PLD+ SYV GR R ++
Sbjct: 463 LEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGSR 500
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHL 483
+SRGID V I + D SY+HR GR R G R L+D E HL
Sbjct: 434 MSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGG--------RATVLID--EHHL 483
Query: 482 SNGFKGQKVLQKYEFALE 429
G + Q F LE
Sbjct: 484 FGGPMSNIIEQLCSFMLE 501
>Z73425-3|CAA97785.1| 451|Caenorhabditis elegans Hypothetical
protein F12F6.7 protein.
Length = 451
Score = 33.5 bits (73), Expect = 0.18
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = -3
Query: 401 RDAWRAVTR--IAVREARLKEIKQELL-NCKKLQGYFEENPSDLAALRRDKALHTVKV-Q 234
+D A TR V EARLKE+K +L N ++ G + S L+ ++D+ + V V
Sbjct: 23 KDKKGAFTRQYFEVYEARLKELKPRILENAEREIGKGKFTHSQLSDAKQDEEIFVVGVIV 82
Query: 233 QHLAHVPEYLLPAALRNEDIV--EDQETVTEKPQVKK 129
+ +A P L +L NED V +D E E+ +VK+
Sbjct: 83 KRIAARPSIL--KSLLNEDKVAYDDYEEDAEEDEVKR 117
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 18/76 (23%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPL-----------------DVNSYVHRAGRTARGNNQGSVLSF 531
+RGID VS VIN+D P+ D +Y+HR GRT R G ++
Sbjct: 516 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 575
Query: 530 VSIREK-PLMDAVEQH 486
+ + +++ +E H
Sbjct: 576 IDSEDSMNMINVLENH 591
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 18/76 (23%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPL-----------------DVNSYVHRAGRTARGNNQGSVLSF 531
+RGID VS VIN+D P+ D +Y+HR GRT R G ++
Sbjct: 541 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 600
Query: 530 VSIREK-PLMDAVEQH 486
+ + +++ +E H
Sbjct: 601 IDSEDSMNMINVLENH 616
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 18/76 (23%)
Frame = -3
Query: 659 SRGIDFQHVSNVINFDFPL-----------------DVNSYVHRAGRTARGNNQGSVLSF 531
+RGID VS VIN+D P+ D +Y+HR GRT R G ++
Sbjct: 925 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 984
Query: 530 VSIREK-PLMDAVEQH 486
+ + +++ +E H
Sbjct: 985 IDSEDSMNMINVLENH 1000
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 33.1 bits (72), Expect = 0.24
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Frame = -3
Query: 485 LSNGFKGQKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLKEIKQELLNCKKLQG 306
L K + L+K+ A E +E R + VTR E K+I+ +L N K
Sbjct: 52 LERAAKAARDLEKFPNAKEALELSRMQE------VTRQKEVENETKKIEAQLANMKSEHI 105
Query: 305 YFEENPSDLAALRRDKALHT-VKVQQHLAHV---PEYLLPAALRNEDIVEDQETVTEKPQ 138
E K H+ + Q LA E + A ++ E + + +E+V ++ Q
Sbjct: 106 RVAEEERRKTLGEETKHAHSRAEYQDQLARKRAEEELAMKARMQEESLRKQEESVKKQEQ 165
Query: 137 VKKRKQNANFGSAKRHKYQARQND 66
+ RKQ A +HKY+ + D
Sbjct: 166 L--RKQTIEHELALKHKYELEKID 187
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTAR---GNNQGSVLSFVSIREKPLMDAVE 492
++RGID V + I + D ++Y HR GR R G ++ ++ P + +E
Sbjct: 436 LARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKSTVLVEHHQLQGGPASNVIE 495
Query: 491 QHLSNGFKGQK 459
Q L N K K
Sbjct: 496 Q-LYNFMKESK 505
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = -3
Query: 653 GIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHLSNG 474
GID V NVI++ P ++ SY GR R + F + ++ ++ ++ L N
Sbjct: 509 GIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKD---LNTIKFKLRNS 565
Query: 473 FKGQKVLQKYEFALEEVE 420
+ ++V++ L ++E
Sbjct: 566 QQKEEVVENLTMMLRQLE 583
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQHL 483
++RG++ + S +IN+D ++ +Y+ R GR ++G +SF + + + +E H
Sbjct: 287 MARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHY 345
Query: 482 S 480
S
Sbjct: 346 S 346
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFPLDVNSYVHRAGRTA 564
++RGID V + I + D ++Y HR GR +
Sbjct: 283 LARGIDVSSVKHTIIMEMSADFDTYKHRIGRVS 315
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 191 LRNEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQN 69
L+N+ I + ++ ++ Q+KK +Q + + H+ QA+QN
Sbjct: 261 LQNQRIQDSEKVAIQQNQIKKEQQQSQPTPQQIHQQQAQQN 301
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 191 LRNEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQN 69
L+N+ I + ++ ++ Q+KK +Q + + H+ QA+QN
Sbjct: 773 LQNQRIQDSEKVAIQQNQIKKEQQQSQPTPQQIHQQQAQQN 813
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 191 LRNEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQN 69
L+N+ I + ++ ++ Q+KK +Q + + H+ QA+QN
Sbjct: 776 LQNQRIQDSEKVAIQQNQIKKEQQQSQPTPQQIHQQQAQQN 816
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 191 LRNEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQN 69
L+N+ I + ++ ++ Q+KK +Q + + H+ QA+QN
Sbjct: 776 LQNQRIQDSEKVAIQQNQIKKEQQQSQPTPQQIHQQQAQQN 816
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 394 ASLERYLNPSTS-SSANSYFCKTFCPLNPLERCCSTASIKGFSRIDTNDSTEP*LFPRAV 570
A+ R PS S S+ N++ C T C + ++ C++A+ + S I + L P A
Sbjct: 77 ATCVRACIPSCSKSTGNTFACSTTCE-STCDKTCASAAQQAMSHIQVSPPNPQPLVPIAA 135
Query: 571 RPAL 582
P +
Sbjct: 136 APTV 139
>Z69635-5|CAA93458.1| 350|Caenorhabditis elegans Hypothetical
protein F19B6.3 protein.
Length = 350
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -3
Query: 662 VSRGIDFQHVSNVINFDFP-LDVNSYVHRAGRTARGNNQGSVLSFVSIREKPLMDAVEQH 486
V ++F + N++ DFP L+V R ++ S +S V+ ++
Sbjct: 123 VESAVEFARIDNIL--DFPSLEV---------AKRDDDDASAISTVAASNSEA--SLVAS 169
Query: 485 LSNGFKGQKVLQKYEFALEEVEGFRYRSRDAWRAVTRIAVREARLK 348
+ N FK + +++ + + EGF YR+ +R V + RLK
Sbjct: 170 IPNVFKVENIVEPPQMTIMRWEGFEYRTNRRYRTVCKKCEGLQRLK 215
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 182 EDIVEDQETVTEKPQVK-KRKQNANFGSAKRHKYQARQNDPXKSFDVKKKKQTAGE 18
+D ED++ +KP K ++K+ + K K + ++ +P KS KK+ + GE
Sbjct: 147 KDKKEDEKKDDKKPGEKEEKKEEVKKETKKEEKKEEKKEEPKKSEAPKKEGEPKGE 202
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 443 EFALEEVEGFRYRSRDAWRAVTRIAVREAR--LKEIKQELLNCKKLQGYFEENPSDLAAL 270
E L E G R+ DA R T+I +A K +K+ L+ GY ++NP + + +
Sbjct: 531 EMFLMERHGGTTRTADAIRYATKIFEGKAHPARKNVKKVLVVFT--DGYSQDNPKEASRM 588
Query: 269 RRDKALHTVKV 237
R K + + V
Sbjct: 589 ARAKGIQLIAV 599
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 443 EFALEEVEGFRYRSRDAWRAVTRIAVREAR--LKEIKQELLNCKKLQGYFEENPSDLAAL 270
E L E G R+ DA R T+I +A K +K+ L+ GY ++NP + + +
Sbjct: 531 EMFLMERHGGTTRTADAIRYATKIFEGKAHPARKNVKKVLVVFT--DGYSQDNPKEASRM 588
Query: 269 RRDKALHTVKV 237
R K + + V
Sbjct: 589 ARAKGIQLIAV 599
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 182 EDIVEDQETVTEKPQVK-KRKQNANFGSAKRHKYQARQNDPXKSFDVKKKKQTAGE 18
+D ED++ +KP K ++K+ K K + ++ +P K+ KK+ +T GE
Sbjct: 153 KDKKEDEKMDDKKPGEKEEKKEEFKKEMKKEEKKEEKKEEPKKNDAPKKEGETKGE 208
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 185 NEDIVEDQETVTEKPQVKKRKQNANFGSAK-RHKYQARQNDPXKSFDVKKKKQTAGET*E 9
+ED E++E ++K K +KQ ++ S + + + +++ K VKK+ +T+ E+ E
Sbjct: 129 DEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDE 188
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 185 NEDIVEDQETVTEKPQVKKRKQNANFGSAK-RHKYQARQNDPXKSFDVKKKKQTAGET*E 9
+ED E++E ++K K +KQ ++ S + + + +++ K VKK+ +T+ E+ E
Sbjct: 129 DEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDE 188
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -3
Query: 218 VPEYLLPAALRNEDIVEDQETVTEKPQVKKRKQNANFG--SAKRHKYQARQNDPXKSFDV 45
V EYL+ N + D+ +K ++ K FG + +H + + P F
Sbjct: 80 VEEYLVEDISENGTYINDRRLSKDKREILKSGDTIKFGHKNGSQHVADQKYDHPDADFAF 139
Query: 44 KKKKQTAGE 18
+ TAGE
Sbjct: 140 CVEMSTAGE 148
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = -3
Query: 248 TVKVQQHLAHVPEYLLPAALRNEDIVEDQETVTEKPQVKKRKQNANF---GSAKRHKYQA 78
T ++ L +P L ++ + DQ+ KP +KK N GS R K +
Sbjct: 39 TAPPEKKLPTIPGKLPKRSVEPPEESRDQKPAGNKPNLKKSPSNPRIPPGGSHPRKKPKV 98
Query: 77 RQNDP-XKSFDVKKKKQTA 24
DP K + KKK +A
Sbjct: 99 PNRDPSGKHVNSDKKKPSA 117
>AL032633-4|CAN86635.1| 179|Caenorhabditis elegans Hypothetical
protein Y106G6A.5b protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -3
Query: 497 VEQHLSNGFKGQKVLQKYEFALEEVEGFRYRSRDAW---RAVTRIAVREARLKEIKQELL 327
+++ L N + K +++ + ++ F ++ A A+ +A E + I+Q+
Sbjct: 71 IDEFLRNSVEFDKKIREINAQISKLTRFCNQTEQAMTYLEALCEVAHTEGEVDLIRQQAK 130
Query: 326 NCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPEYL 204
+ + E+PS L + R + VK QQ + E+L
Sbjct: 131 SAATIVQIECESPSVLTSALRSRPEDAVKAQQEEVMLEEFL 171
>AL032633-3|CAA21598.1| 210|Caenorhabditis elegans Hypothetical
protein Y106G6A.5a protein.
Length = 210
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -3
Query: 497 VEQHLSNGFKGQKVLQKYEFALEEVEGFRYRSRDAW---RAVTRIAVREARLKEIKQELL 327
+++ L N + K +++ + ++ F ++ A A+ +A E + I+Q+
Sbjct: 102 IDEFLRNSVEFDKKIREINAQISKLTRFCNQTEQAMTYLEALCEVAHTEGEVDLIRQQAK 161
Query: 326 NCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPEYL 204
+ + E+PS L + R + VK QQ + E+L
Sbjct: 162 SAATIVQIECESPSVLTSALRSRPEDAVKAQQEEVMLEEFL 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,806
Number of Sequences: 27780
Number of extensions: 366387
Number of successful extensions: 1360
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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