Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_J19
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 99 2e-21
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 99 2e-21
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 99 2e-21
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 99 2e-21
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 99 2e-21
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 99 2e-21
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 99 2e-21
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 95 4e-20
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 74 1e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 74 1e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 4e-12
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 59 3e-09
BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein. 28 6.4
AL133410-16|CAI10992.1| 156|Homo sapiens chromosome 9 open read... 28 6.4
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 99 bits (238), Expect = 2e-21
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RMGE 2
RMGE
Sbjct: 61 RMGE 64
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 95.5 bits (227), Expect = 4e-20
Identities = 44/62 (70%), Positives = 49/62 (79%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIR 14
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 13 RM 8
RM
Sbjct: 61 RM 62
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTD 44
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR D
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGRREGCD 50
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTD 44
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR D
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGRREGCD 50
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -3
Query: 193 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 83
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 133 NRLIHAKDHASVQLVIADVDPATGRAADTDKMYVXCGAIRRMGE 2
NR+I AKDHAS+Q+ +A+VD TGR K Y CGAIRRMGE
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGE 44
>BC146808-1|AAI46809.1| 402|Homo sapiens C9orf128 protein protein.
Length = 402
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 329 RPADDLSIPCTVWTCRFFMF 270
R D+S+PC V CR FMF
Sbjct: 281 RIISDISVPCKVSQCRCFMF 300
>AL133410-16|CAI10992.1| 156|Homo sapiens chromosome 9 open reading
frame 128 protein.
Length = 156
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 329 RPADDLSIPCTVWTCRFFMF 270
R D+S+PC V CR FMF
Sbjct: 35 RIISDISVPCKVSQCRCFMF 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,871,288
Number of Sequences: 237096
Number of extensions: 901272
Number of successful extensions: 2786
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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