Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_J07
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0129 - 872127-872681,872762-873070,873180-873347                 29   2.6  
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680           29   4.5  

>05_01_0129 - 872127-872681,872762-873070,873180-873347
          Length = 343

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = -1

Query: 374 DFSRAPLCSDAAVDSWL--HYFELD 306
           D S+A LC D  VDSWL   ++ELD
Sbjct: 262 DESQAVLCPDVEVDSWLGIDFYELD 286


>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
          Length = 612

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 584 EXRTALXGXYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGA 417
           E RT L G  +  E +PG+V+ V+  + +GKS  ++ +   L   +   V+  G A
Sbjct: 54  EERTILKG--ITGEARPGEVLAVLGPSGSGKSTLLSILGGRLAGRHAGTVLAGGRA 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,928,170
Number of Sequences: 37544
Number of extensions: 217598
Number of successful extensions: 748
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)