Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_J06
         (793 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119212-1|AAM51072.1|  429|Drosophila melanogaster SD15916p pro...    29   5.5  
AE014296-3745|AAF51885.1|  429|Drosophila melanogaster CG12768-P...    29   5.5  
AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p pro...    29   9.6  
AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-P...    29   9.6  
AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-P...    29   9.6  

>AY119212-1|AAM51072.1|  429|Drosophila melanogaster SD15916p
           protein.
          Length = 429

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 608 VRT*DKPEQNKKKFDRMNNKVEENMK-ELQLK*SHKNTTSSGSCVPHILVRCRN 766
           V T + PE  +KK   +  + ++ +K  LQL  + KN++S  +  PH+++   N
Sbjct: 266 VMTGNGPEATRKKLATIRPQTKQQLKARLQLP-TPKNSSSYATSPPHLIINANN 318


>AE014296-3745|AAF51885.1|  429|Drosophila melanogaster CG12768-PA
           protein.
          Length = 429

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 608 VRT*DKPEQNKKKFDRMNNKVEENMK-ELQLK*SHKNTTSSGSCVPHILVRCRN 766
           V T + PE  +KK   +  + ++ +K  LQL  + KN++S  +  PH+++   N
Sbjct: 266 VMTGNGPEATRKKLATIRPQTKQQLKARLQLP-TPKNSSSYATSPPHLIINANN 318


>AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 629 EQNKKKFDRMNNKVEENMKELQLK*SHKNTT 721
           E++KKK  +M  K+ E  KEL+ +  H N T
Sbjct: 385 EKHKKKIQKMQAKILELQKELKDQNKHSNVT 415


>AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-PA
            protein.
          Length = 1545

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 594  VPSCGEYFHVLGTGGEQSV*RTEKSPSLVKIKTCQND 484
            VPS G      G+GG  S   T  SPS++++ TC ND
Sbjct: 1489 VPSAGS-----GSGGGAS---TSSSPSIIRMSTCSND 1517


>AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-PA
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 629 EQNKKKFDRMNNKVEENMKELQLK*SHKNTT 721
           E++KKK  +M  K+ E  KEL+ +  H N T
Sbjct: 385 EKHKKKIQKMQAKILELQKELKDQNKHSNVT 415


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,052,061
Number of Sequences: 53049
Number of extensions: 680401
Number of successful extensions: 1477
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)