Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_J02
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like f... 59 2e-08
BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like f... 59 2e-08
BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like f... 59 2e-08
BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein. 59 2e-08
AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein p... 59 2e-08
BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein. 48 3e-05
AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein. 48 3e-05
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 31 3.8
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 31 3.8
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 31 3.8
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 31 3.8
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 31 3.8
>DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 181
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINRQATQADGALFQ 303
RLIKGDGEVLEEIV+KERH+EIN+QAT+ D FQ
Sbjct: 140 RLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQ 174
>BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 352
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINRQATQADGALFQ 303
RLIKGDGEVLEEIV+KERH+EIN+QAT+ D FQ
Sbjct: 311 RLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQ 345
>BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 360
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINRQATQADGALFQ 303
RLIKGDGEVLEEIV+KERH+EIN+QAT+ D FQ
Sbjct: 319 RLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQ 353
>BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein.
Length = 218
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINRQATQADGALFQ 303
RLIKGDGEVLEEIV+KERH+EIN+QAT+ D FQ
Sbjct: 177 RLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQ 211
>AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein
protein.
Length = 218
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINRQATQADGALFQ 303
RLIKGDGEVLEEIV+KERH+EIN+QAT+ D FQ
Sbjct: 177 RLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQ 211
>BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein.
Length = 215
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINR 336
RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 177 RLIKGDGEVLEEIVTKERHREINK 200
>AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein.
Length = 432
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = -2
Query: 407 RLIKGDGEVLEEIVSKERHKEINR 336
RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 394 RLIKGDGEVLEEIVTKERHREINK 417
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 773 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LWRVLNCRQQ 606
PY + +S QR LP L+ N S T PER+D+SFF G LW + C
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVP 406
Query: 605 LGSAPS 588
G+ S
Sbjct: 407 EGAGAS 412
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 773 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LWRVLNCRQQ 606
PY + +S QR LP L+ N S T PER+D+SFF G LW + C
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVP 406
Query: 605 LGSAPS 588
G+ S
Sbjct: 407 EGAGAS 412
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 773 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LWRVLNCRQQ 606
PY + +S QR LP L+ N S T PER+D+SFF G LW + C
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVP 406
Query: 605 LGSAPS 588
G+ S
Sbjct: 407 EGAGAS 412
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 773 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LWRVLNCRQQ 606
PY + +S QR LP L+ N S T PER+D+SFF G LW + C
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVP 406
Query: 605 LGSAPS 588
G+ S
Sbjct: 407 EGAGAS 412
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 773 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LWRVLNCRQQ 606
PY + +S QR LP L+ N S T PER+D+SFF G LW + C
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVP 406
Query: 605 LGSAPS 588
G+ S
Sbjct: 407 EGAGAS 412
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,360,638
Number of Sequences: 237096
Number of extensions: 2791227
Number of successful extensions: 5156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5156
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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