Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_I23
(330 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071180-1|AAL48802.1| 77|Drosophila melanogaster RE23260p pro... 72 2e-13
AE014296-1346|AAF50504.1| 77|Drosophila melanogaster CG8268-PA... 72 2e-13
AY118396-1|AAM48425.1| 605|Drosophila melanogaster RE56844p pro... 29 1.1
AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p pro... 29 1.1
AE014134-2100|AAF53123.1| 605|Drosophila melanogaster CG14940-P... 29 1.1
AY058723-1|AAL13952.1| 858|Drosophila melanogaster LD46494p pro... 28 3.3
AE014134-751|AAF51002.1| 858|Drosophila melanogaster CG17840-PA... 28 3.3
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 27 5.7
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 27 5.7
BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p pro... 26 10.0
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 26 10.0
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 26 10.0
AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-P... 26 10.0
AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-P... 26 10.0
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 26 10.0
AE013599-1723|AAF58369.1| 417|Drosophila melanogaster CG6016-PB... 26 10.0
AE013599-1722|AAF58370.1| 417|Drosophila melanogaster CG6016-PA... 26 10.0
>AY071180-1|AAL48802.1| 77|Drosophila melanogaster RE23260p
protein.
Length = 77
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -3
Query: 220 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTE 59
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAE 54
>AE014296-1346|AAF50504.1| 77|Drosophila melanogaster CG8268-PA
protein.
Length = 77
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -3
Query: 220 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTE 59
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAE 54
>AY118396-1|AAM48425.1| 605|Drosophila melanogaster RE56844p
protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 159 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 58
I+ +LGT + H Q++ M +LLT++ A KQK
Sbjct: 345 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 378
>AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p
protein.
Length = 834
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 159 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 58
I+ +LGT + H Q++ M +LLT++ A KQK
Sbjct: 574 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 607
>AE014134-2100|AAF53123.1| 605|Drosophila melanogaster CG14940-PA
protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 159 IQ*ILGTVLNIHIQKVHLMSKLLTIKSAFNTKQK 58
I+ +LGT + H Q++ M +LLT++ A KQK
Sbjct: 345 IEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK 378
>AY058723-1|AAL13952.1| 858|Drosophila melanogaster LD46494p
protein.
Length = 858
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 217 SLRPIIDYSLEMFLKIVPEYVGTEQYAIYAR--RTHS 321
+LRP+ DY + +L + P V + IYA RT S
Sbjct: 801 TLRPLSDYGTDSYLSVRPPVVPRKSLTIYAEYCRTRS 837
>AE014134-751|AAF51002.1| 858|Drosophila melanogaster CG17840-PA
protein.
Length = 858
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 217 SLRPIIDYSLEMFLKIVPEYVGTEQYAIYAR--RTHS 321
+LRP+ DY + +L + P V + IYA RT S
Sbjct: 801 TLRPLSDYGTDSYLSVRPPVVPRKSLTIYAEYCRTRS 837
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 265 LFLKTFLVNSQ*LAVMTFVP-NWEEFEKAAEMLYLQDPINTRYSVK 131
+ +K F S L + +P N EF LY QDP N RY K
Sbjct: 2648 IVVKKFNTASTWLHNVLILPGNCVEFSLETASLYAQDPHNNRYGFK 2693
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 265 LFLKTFLVNSQ*LAVMTFVP-NWEEFEKAAEMLYLQDPINTRYSVK 131
+ +K F S L + +P N EF LY QDP N RY K
Sbjct: 2648 IVVKKFNTASTWLHNVLILPGNCVEFSLETASLYAQDPHNNRYGFK 2693
>BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p
protein.
Length = 511
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 91 DNKKCLQYKTEVQSRC*ENEINLCQIY 11
DN+K ++ TE S C E EI + IY
Sbjct: 444 DNQKDMEMATEKLSECLEREITVKNIY 470
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 169 ITFPRLSQTLPNLEQKSLRPIIDYSLEMFLKIVPEYVGTEQYAIYA 306
IT L Q +E + +++ ++F + PEYV +Q IYA
Sbjct: 3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYA 48
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 169 ITFPRLSQTLPNLEQKSLRPIIDYSLEMFLKIVPEYVGTEQYAIYA 306
IT L Q +E + +++ ++F + PEYV +Q IYA
Sbjct: 3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYA 48
>AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-PB,
isoform B protein.
Length = 511
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 91 DNKKCLQYKTEVQSRC*ENEINLCQIY 11
DN+K ++ TE S C E EI + IY
Sbjct: 444 DNQKDMEMATEKLSECLEREITVKNIY 470
>AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-PA,
isoform A protein.
Length = 511
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 91 DNKKCLQYKTEVQSRC*ENEINLCQIY 11
DN+K ++ TE S C E EI + IY
Sbjct: 444 DNQKDMEMATEKLSECLEREITVKNIY 470
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 169 ITFPRLSQTLPNLEQKSLRPIIDYSLEMFLKIVPEYVGTEQYAIYA 306
IT L Q +E + +++ ++F + PEYV +Q IYA
Sbjct: 3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYA 48
>AE013599-1723|AAF58369.1| 417|Drosophila melanogaster CG6016-PB,
isoform B protein.
Length = 417
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 28 LSHFPNILTVLLFCIEGTFYC 90
L H+PN L FC FYC
Sbjct: 144 LGHYPNWLFFQCFCAIALFYC 164
>AE013599-1722|AAF58370.1| 417|Drosophila melanogaster CG6016-PA,
isoform A protein.
Length = 417
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 28 LSHFPNILTVLLFCIEGTFYC 90
L H+PN L FC FYC
Sbjct: 144 LGHYPNWLFFQCFCAIALFYC 164
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,284,901
Number of Sequences: 53049
Number of extensions: 249668
Number of successful extensions: 592
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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